Gene: C02p36990
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C02p36990
- Transcript Identifier C02p36990
- Gene Type Coding gene
- Location C02 : 30492187-30499324 : negative
Gene Family Information
- ID HOM05D003914
- #Genes/#Species 178/96
- Phylogenetic origin
- ID ORTHO05D001189
- #Genes/#Species 461/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C02p36990.1_BnaDAR
- v5 BnaC02g46530D
- single_cell_id C02p36990.1-BnaDAR
- ensembl GSBRNA2T00052136001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006913 | IEA | InterPro | nucleocytoplasmic transport | |
| GO:0006406 | ISO | PLAZA Integrative Orthology | mRNA export from nucleus | AT1G80680 |
| GO:0002758 | ISO | PLAZA Integrative Orthology | innate immune response-activating signal transduction | AT1G80680 |
| GO:0048574 | ISO | PLAZA Integrative Orthology | long-day photoperiodism, flowering | AT1G80680 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT1G80680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G80680 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005643 | IEA | InterPro | nuclear pore | |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT1G80680 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G80680 |
| GO:0031965 | ISO | PLAZA Integrative Orthology | nuclear membrane | AT1G80680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007230 | Peptidase S59, nucleoporin |
| IPR021967 | Nuclear protein 96 |
| IPR036903 | Peptidase S59, nucleoporin superfamily |
| IPR042460 | DCN1-like, PONY binding domain |
| IPR037665 | Nucleoporin peptidase S59-like |
| IPR005176 | Potentiating neddylation domain |
| IPR037637 | Nuclear pore complex protein NUP98-NUP96 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.1.4 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP96/MOS3) |