Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G16050 LG-4 - View
Actinidia chinensis Actinidia34453 Lachesis_group15 + View
Actinidia chinensis Actinidia23890 Lachesis_group9 - View
Arabidopsis lyrata AL5G26380 scaffold_5 - View
Arabidopsis lyrata AL8G35090 scaffold_8 + View
Amaranthus hybridus Ah.08g221100 Zinc finger CCCH domain-containing protein 42 (AtC3H42) AmaHy_arrow1_Scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V0GB02 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2AHU2Q K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT5G58790 hypothetical protein unknown protein%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 7 growth stages%3B BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT3G47120.1)%3B Has 4 Blast hits to 4 proteins in 2 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G47120 RNA recognition motif (RRM)-containing protein RNA recognition motif (RRM)-containing protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 3 (TAIR:AT5G61030.1)%3B Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159%3B Bacteria - 19385%3B Metazoa - 64482%3B Fungi - 8819%3B Plants - 85595%3B Viruses - 264%3B Other Eukaryotes - 23194 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB01g00943 ChrB01 + View
Brassica carinata BcaC01g01847 ChrC01 + View
Brassica napus A06p20410 A06 + View
Brassica napus C03p71400 C03 - View
Brassica oleracea BolC3t19423H C3 - View
Brassica rapa BraA06t25116Z A06 + View
Beta vulgaris EL10Ac7g16152 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Chr7_EL10_PGA_scaffold5 - View
Cannabis sativa CANSAT54G2601 NC_044375.1 + View
Cicer arietinum L. Ca_05594_v3 Ca_LG2_v3 - View
Corylus avellana Haze_24293 Similar to At3g47120: Zinc finger CCCH domain-containing protein 42 (Arabidopsis thaliana OX%3D3702) 6 - View
Citrus clementina Ciclev10028940m.g scaffold_8 - View
Ceratophyllum demersum CDE02G0086 1 + View
Carpinus fangiana Cfa011686 Cfa04 - View
Cardamine hirsuta CARHR155770 RNA-binding protein Chr5 - View
Carya illinoinensis CiPaw.13G078700 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Chr13 + View
Citrullus lanatus ClCG02G019610 RNA-binding protein CG_Chr02 + View
Cucumis melo MELO3C025859.2 zinc finger CCCH domain-containing protein 25 chr11 - View
Carica papaya Cpa.g.sc112.33 supercontig_112 + View
Chenopodium quinoa AUR62020118 Os03g0826400: Zinc finger CCCH domain-containing protein 25 C_Quinoa_Scaffold_2465 - View
Chenopodium quinoa AUR62001659 At3g47120: Zinc finger CCCH domain-containing protein 42 C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0005s1334 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) scaffold_5 - View
Daucus carota DCAR_007383 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv28633 GWHABJS00000010 - View
Durio zibethinus Duzib168G0373 NW_019168159.1 + View
Erigeron canadensis ECA247G1506 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.B02261 Chr02 + View
Eutrema salsugineum Thhalv10015340m.g K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) scaffold_2 - View
Fragaria x ananassa FAN25G3125 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Fvb3-1 - View
Fragaria x ananassa FAN16G2933 KOG0126 - Predicted RNA-binding protein (RRM superfamily) Fvb3-3 - View
Fragaria x ananassa FAN11G3572 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Fvb3-4 + View
Fragaria vesca FvH4_3g38440 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Fvb3 - View
Gossypium hirsutum Gohir.D05G090100 KOG0126 - Predicted RNA-binding protein (RRM superfamily) D05 + View
Gossypium hirsutum Gohir.A05G089100 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) A05 + View
Glycine max Glyma.14G192900 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Gm14 - View
Glycine max Glyma.02G226100 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Gm02 - View
Gossypium raimondii Gorai.009G092500 Chr09 + View
Helianthus annuus HanXRQChr08g0229511 Putative U2 auxiliary factor small subunit; Nucleotide-binding alpha-beta plait domain HanXRQChr08 + View
Hydrangea macrophylla Hma1.2p1_0227F.1_g096450 Hma1.2p1_0227F.1 - View
Lupinus albus Lalb_Chr04g0252261 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Lalb_Chr04 + View
Lonicera japonica Lj2A1080T48 GWHAAZE00000002 - View
Malus domestica MD11G1076000 RNA recognition motif (RRM)-containing protein Chr11 + View
Malus domestica MD03G1072000 RNA recognition motif (RRM)-containing protein Chr03 + View
Manihot esculenta Manes.02G120400 Chromosome02 + View
Medicago truncatula Medtr5g070100 RNA recognition motif (RRM) containing protein chr5 - View
Nelumbo nucifera Nn2g13685 chr2 - View
Punica granatum PGR102G1694 NC_045129.1 - View
Prunus persica Prupe.6G058600 Pp06 + View
Pisum sativum Psat2g058880 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr2LG1 + View
Populus trichocarpa Potri.009G044900 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Chr09 - View
Phaseolus vulgaris Phvul.008G261900 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) Chr08 + View
Quercus lobata QL01p038020 1 - View
Rhododendron simsii Rhsim01G0236200 chr01 - View
Salix brachista Sabra09G0032400 GWHAAZH00000009 - View
Simmondsia chinensis Sc21g0006290 GWHAASQ00000021 - View
Sechium edule Sed0006470 LG05 - View
Schrenkiella parvula Sp5g14620 K13107 - RNA-binding motif protein, X-linked 2 (RBMX2, IST3) ch5-1 + View
Trochodendron aralioides TAR623G0695 group7 - View
Trochodendron aralioides TAR369G0957 group18 + View
Theobroma cacao Thecc.09G302900 RNA recognition motif-containing protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104810721 zinc finger CCCH domain-containing protein 25 NW_010965304.1 + View
Tripterygium wilfordii TWI79G0029 NC_052238.1 + View
Vaccinium macrocarpon vmacro14591 Similar to At3g47120: Zinc finger CCCH domain-containing protein 42 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G1210 CM024073.1 + View
Vitis vinifera GSVIVG01024759001 chr6 - View