Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004712 PREDICTED: barley B recombinant-like protein D [Nicotiana sylvestris] Chr2 - View
CSS0007067 Protein BASIC PENTACYSTEINE6 [Glycine soja] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G16340 LG-6 + View
Acer truncatum Atru.chr5.3160 chr5 + View
Acer truncatum Atru.chr13.337 chr13 - View
Actinidia chinensis Actinidia15396 Lachesis_group26 - View
Actinidia chinensis Actinidia29792 Lachesis_group27 - View
Actinidia chinensis Actinidia31005 Lachesis_group25 + View
Actinidia chinensis Actinidia37975 Lachesis_group7 - View
Arabidopsis lyrata AL4G10380 scaffold_4 - View
Arabidopsis lyrata AL7G10800 scaffold_7 - View
Avicennia marina MSTRG.22327 ScioBoG_3008_HRSCAF_3015 + View
Avicennia marina MSTRG.24258 ScioBoG_4088_HRSCAF_4107 - View
Avicennia marina MSTRG.27661 ScioBoG_94932_HRSCAF_95134 + View
Aquilegia oxysepala Aqoxy6G02331 CHR06 - View
Aquilegia oxysepala Aqoxy5G01469 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E4SR7P PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I4ZNT8 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT2G21240 basic pentacysteine 4 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 4 (BPC4)%3B CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409)%3B BEST Arabidopsis thaliana protein match is: basic pentacysteine 5 (TAIR:AT4G38910.2)%3B Has 263 Blast hits to 247 proteins in 33 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 40%3B Fungi - 0%3B Plants - 219%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G38910 basic pentacysteine 5 Encodes a basic pentacysteine protein that is localized to the nucleus and specifically binds in vitro to GA dinucleotide repeats. basic pentacysteine 5 (BPC5)%3B CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409)%3B BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 (TAIR:AT2G21240.2)%3B Has 238 Blast hits to 238 proteins in 23 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 2%3B Fungi - 0%3B Plants - 234%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC01g00264 ChrC01 - View
Brassica carinata BcaNung01956 Contig684 + View
Brassica carinata BcaB03g12232 ChrB03 - View
Brassica napus A06p48840 A06 + View
Brassica napus A04p16030 A04 - View
Brassica napus C03p77400 C03 - View
Brassica napus C07p63500 C07 + View
Brassica oleracea BolC7t46764H C7 + View
Brassica oleracea BolC3t19996H C3 - View
Brassica rapa BraA08t34352Z A08 + View
Beta vulgaris EL10Ac1g00451 PTHR31421//PTHR31421:SF2 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE6 Chr1_EL10_PGA_scaffold3 + View
Cannabis sativa CANSAT25G0271 NC_044370.1 + View
Cicer arietinum L. Ca_13398_v3 Ca_LG4_v3 + View
Corylus avellana Haze_22602 Similar to BPC6: Protein BASIC PENTACYSTEINE6 (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc10_g01980 Protein BASIC PENTACYSTEINE6 chr10 + View
Coffea canephora Cc02_g16840 Protein BASIC PENTACYSTEINE4 chr2 - View
Coffea canephora Cc07_g10550 Putative Protein BASIC PENTACYSTEINE6 chr7 + View
Citrus clementina Ciclev10001400m.g scaffold_5 + View
Ceratophyllum demersum CDE05G3502 3 + View
Cardamine hirsuta CARHR247850 GAGA-binding transcriptional activator Chr7 + View
Cardamine hirsuta CARHR112110 GAGA-binding transcriptional activator Chr4 - View
Carya illinoinensis CiPaw.08G063900 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr08 + View
Carya illinoinensis CiPaw.07G153000 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr07 - View
Carya illinoinensis CiPaw.06G127500 PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED Chr06 - View
Carya illinoinensis CiPaw.05G074100 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Chr05 + View
Citrullus lanatus ClCG02G004470 GAGA-binding transcriptional activator CG_Chr02 - View
Citrullus lanatus ClCG08G014430 GAGA-binding transcriptional activator CG_Chr08 - View
Cucumis melo MELO3C013409.2 GAGA-binding transcriptional activator chr01 - View
Cucumis melo MELO3C010996.2 GAGA-binding transcriptional activator chr03 - View
Corchorus olitorius COL.COLO4_26178 GAGA binding-like protein AWUE01019218.1 - View
Chenopodium quinoa AUR62019144 BPC6: Protein BASIC PENTACYSTEINE6 C_Quinoa_Scaffold_3876 - View
Chenopodium quinoa AUR62014407 BPC6: Protein BASIC PENTACYSTEINE6 C_Quinoa_Scaffold_1566 - View
Capsella rubella Carub.0004s0029 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_2G029370 GAGA-binding transcriptional activator chr2 + View
Daucus carota DCAR_017498 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv23448 GWHABJS00000005 - View
Davidia involucrata Dinv31820 GWHABJS00000002 + View
Davidia involucrata Dinv40069 GWHABJS00000014 - View
Davidia involucrata Dinv41991 GWHABJS00000002 + View
Durio zibethinus Duzib093G1191 NW_019167937.1 + View
Durio zibethinus Duzib116G0679 NW_019167949.1 - View
Durio zibethinus Duzib052G1043 NW_019167849.1 + View
Durio zibethinus Duzib132G0176 NW_019167915.1 - View
Durio zibethinus Duzib248G0498 NW_019168048.1 + View
Durio zibethinus Duzib041G0420 NW_019167826.1 - View
Eucalyptus grandis Eucgr.I01334 Chr09 + View
Erythranthe guttata Migut.N03139 scaffold_14 + View
Erythranthe guttata Migut.N01298 scaffold_14 - View
Eutrema salsugineum Thhalv10025867m.g PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10000273m.g PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED scaffold_15 - View
Fragaria x ananassa FAN15G1283 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Fvb2-4 + View
Fragaria x ananassa FAN27G2582 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Fvb2-1 - View
Fragaria x ananassa FAN20G0285 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Fvb2-3 + View
Fragaria vesca FvH4_2g38840 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Fvb2 - View
Gossypium hirsutum Gohir.D01G101100 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 D01 + View
Gossypium hirsutum Gohir.A01G112800 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 A01 - View
Glycine max Glyma.06G026100 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Gm06 - View
Glycine max Glyma.04G026300 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Gm04 - View
Gossypium raimondii Gorai.002G124900 Chr02 - View
Helianthus annuus HanXRQChr16g0531041 Putative GAGA-binding transcriptional activator HanXRQChr16 - View
Hydrangea macrophylla Hma1.2p1_0773F.1_g216250 Hma1.2p1_0773F.1 + View
Hydrangea macrophylla Hma1.2p1_0066F.1_g035720 Hma1.2p1_0066F.1 - View
Lupinus albus Lalb_Chr08g0246101 PTHR31421//PTHR31421:SF2 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE6 Lalb_Chr08 + View
Lupinus albus Lalb_Chr11g0062031 PTHR31421//PTHR31421:SF2 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE6 Lalb_Chr11 - View
Lupinus albus Lalb_Chr23g0266271 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Lalb_Chr23 - View
Lotus japonicus Lj1g0023499 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 chr1 - View
Lonicera japonica Lj4P217T24 GWHAAZE00000004 + View
Lonicera japonica Lj2C465T10 GWHAAZE00000002 + View
Lonicera japonica Lj4P793T15 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_3_73960 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI05_g39815_MAGBIO AED:0.05 Chr05 + View
Malus domestica MD15G1015400 basic pentacysteine 6 Chr15 - View
Malus domestica MD05G1054600 basic pentacysteine 4 Chr05 - View
Malus domestica MD08G1016400 basic pentacysteine 6 Chr08 - View
Manihot esculenta Manes.04G082700 Chromosome04 - View
Manihot esculenta Manes.05G151500 Chromosome05 - View
Medicago truncatula Medtr1g023660 GAGA-binding transcriptional activator BBR/BPC6-like protein chr1 + View
Nelumbo nucifera Nn5g29258 chr5 + View
Olea europaea Oeu046250.1 chr10 - View
Petunia axillaris Peaxi162Scf00186g00011 basic pentacysteine 6 Peaxi162Scf00186 + View
Petunia axillaris Peaxi162Scf00016g00005 basic pentacysteine 4 Peaxi162Scf00016 - View
Petunia axillaris Peaxi162Scf00287g01628 basic pentacysteine 6 Peaxi162Scf00287 + View
Punica granatum PGR142G2865 NC_045128.1 - View
Punica granatum PGR042G0039 NC_045130.1 - View
Punica granatum PGR031G2552 NC_045127.1 - View
Prunus persica Prupe.1G369400 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Pp01 - View
Papaver somniferum PSO675G6971 NC_039358.1 + View
Papaver somniferum PSO541G6429 NC_039363.1 + View
Populus trichocarpa Potri.005G235900 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr05 + View
Populus trichocarpa Potri.009G125300 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Chr09 + View
Populus trichocarpa Potri.002G026700 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr02 - View
Populus trichocarpa Potri.004G163700 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Chr04 + View
Phaseolus vulgaris Phvul.009G015000 PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Chr09 + View
Quercus lobata QL02p010920 CM012294 + View
Quercus lobata QL06p033679 6 - View
Quercus lobata QL11p046585 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0302391 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim07G0245500 chr07 + View
Rhododendron simsii Rhsim06G0025500 chr06 - View
Rhododendron simsii Rhsim05G0067800 chr05 - View
Rhododendron simsii RhsimUnG0148400 ctg359 - View
Striga asiatica SGA_v2.0_scaffold92G28271 scaffold92 - View
Salvia bowleyana SalBow3G0065 GWHASIU00000006 + View
Salix brachista Sabra09G0096300 GWHAAZH00000009 + View
Salix brachista Sabra02G0021000 GWHAAZH00000002 - View
Salix brachista Sabra04G0109900 GWHAAZH00000004 + View
Simmondsia chinensis Sc02g0005140 GWHAASQ00000002 - View
Sechium edule Sed0009322 LG11 + View
Sechium edule Sed0005737 LG03 - View
Sapria himalayana SHI08088 scaffold7_18583372 - View
Solanum lycopersicum Solyc04g081170.3 GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN91_SOLLC) SL4.0ch04 + View
Schrenkiella parvula Sp4g00440 PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED ch4-1 - View
Schrenkiella parvula Sp7g36930 PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED ch7-6 + View
Solanum pennellii Sopen02g028970 basic pentacysteine 6 (BPC6) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: GAGA binding-like | BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 Spenn-ch02 - View
Solanum pennellii Sopen04g034790 basic pentacysteine 6 (BPC6) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: GAGA binding-like | BEST Arabidopsis thaliana protein match is: basic pentacysteine 4 Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400003553 GAGA-binding transcriptional activator BBR/BPC6 ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400001660 GAGA-binding transcriptional activator BBR/BPC4 ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400003719 GAGA-binding transcriptional activator BBR/BPC6 ST4.03ch04 + View
Selenicereus undatus Hund17230 Scaffold_33675 + View
Trochodendron aralioides TAR381G1604 group11 - View
Trochodendron aralioides TAR376G1144 group14 + View
Trochodendron aralioides TAR625G0325 group4 - View
Theobroma cacao Thecc.08G039100 Basic pentacysteine 6 Chromosome_8 + View
Tarenaya hassleriana THA.LOC104807776 protein BASIC PENTACYSTEINE4-like NW_010963495.1 + View
Tarenaya hassleriana THA.LOC104806904 protein BASIC PENTACYSTEINE6-like NW_010962392.1 + View
Tripterygium wilfordii TWI31G0617 NC_052233.1 - View
Tripterygium wilfordii TWI12G0097 NC_052243.1 - View
Tripterygium wilfordii TWI56G0039 NC_052242.1 + View
Tripterygium wilfordii TWI75G1242 NC_052253.1 - View
Tripterygium wilfordii TWI36G0097 NC_052237.1 + View
Vaccinium macrocarpon vmacro21708 Similar to BPC6: Protein BASIC PENTACYSTEINE6 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1951 CM024072.1 + View
Vitis vinifera GSVIVG01009844001 chr18 + View