Gene: COL.COLO4_26178
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_26178
- Transcript Identifier COL.rna24909
- Gene Type Coding gene
- Location AWUE01019218.1 : 17757-18692 : negative
Gene Family Information
- ID HOM05D000624
- #Genes/#Species 915/95
- Phylogenetic origin
- ID ORTHO05D000495
- #Genes/#Species 860/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna24909
- GenBank OMO75309.1
- id gene26150
- gene_name COLO4_26178
- uniprot A0A1R3HYE9
Descriptions
- Description GAGA binding-like protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT5G42520 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G42520 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G42520 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G42520 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G42520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR010409 | GAGA-binding transcriptional activator |
| Mapman id | Description |
|---|---|
| 15.5.32 | RNA biosynthesis.transcriptional regulation.transcription factor (BBR/BPC) |