Gene: Potri.005G235900

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.005G235900
  • Transcript Identifier Potri.005G235900.2
  • Gene Type Coding gene
  • Location Chr05 : 23391646-23392799 : positive

Gene Family Information

  • ID HOM05D000624
  • #Genes/#Species 915/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.005G235900.v4.1
  • pacid 42803319
  • synonym POPTR_0005s25720

Descriptions

  • Description PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G42520
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT5G42520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G42520
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G42520
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G42520
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G42520
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G42520

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G42520
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G42520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010409 GAGA-binding transcriptional activator
Mapman id Description
15.5.32 RNA biosynthesis.transcriptional regulation.transcription factor (BBR/BPC)