Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0039185 beta-tubulin 3 [Salix arbutifolia] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.448 chr1 - View
Actinidia chinensis Actinidia02010 Lachesis_group23 + View
Actinidia chinensis Actinidia14557 Lachesis_group6 + View
Arabidopsis lyrata AL6G35120 scaffold_6 + View
Avicennia marina MSTRG.86 ScioBoG_102831_HRSCAF_103044 - View
Amaranthus hybridus Ah.02g116530 AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy7G00355 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WA13PC PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X7UXQY PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3M8WGZ PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT5G23860 tubulin beta 8 beta-tubulin%2C preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves%2C stems%2C and flowers. tubulin beta 8 (TUB8)%3B FUNCTIONS IN: protein binding%2C structural constituent of cytoskeleton%3B INVOLVED IN: microtubule-based process%2C response to cyclopentenone%2C response to salt stress%2C response to cold%3B LOCATED IN: tubulin complex%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453)%2C Tubulin (InterPro:IPR000217)%2C Tubulin/FtsZ%2C GTPase domain (InterPro:IPR003008)%2C Tubulin/FtsZ%2C N-terminal (InterPro:IPR019746)%2C Tubulin/FtsZ%2C C-terminal (InterPro:IPR008280)%2C Beta tubulin%2C autoregulation binding site (InterPro:IPR013838)%2C Tubulin%2C conserved site (InterPro:IPR017975)%2C Tubulin/FtsZ%2C 2-layer sandwich domain (InterPro:IPR018316)%3B BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Beta vulgaris EL10Ac5g12782 PTHR11588//PTHR11588:SF72 - TUBULIN // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 + View
Cannabis sativa CANSAT21G0954 NC_044374.1 + View
Cicer arietinum L. Ca_10756_v3 Ca_LG4_v3 - View
Coffea canephora Cc08_g14680 Tubulin beta-1 chain chr8 - View
Coffea canephora Cc02_g02870 Tubulin beta-1 chain chr2 - View
Citrus clementina Ciclev10004755m.g scaffold_9 + View
Carpinus fangiana Cfa012157 Cfa05 - View
Carya illinoinensis CiPaw.04G071500 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Chr04 + View
Carya illinoinensis CiPaw.12G093600 PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED Chr12 + View
Carya illinoinensis CiPaw.11G135700 PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED Chr11 + View
Carya illinoinensis CiPaw.03G107100 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Chr03 + View
Corchorus olitorius COL.COLO4_34440 Tubulin AWUE01022395.1 + View
Chenopodium quinoa AUR62010597 TUBB8: Tubulin beta-8 chain C_Quinoa_Scaffold_1280 - View
Capsella rubella Carub.0006s2158 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED scaffold_6 + View
Cucumis sativus L. CsaV3_5G002840 Tubulin beta chain chr5 + View
Davidia involucrata Dinv38953 GWHABJS00000003 - View
Davidia involucrata Dinv37644 GWHABJS00000017 + View
Durio zibethinus Duzib205G1712 NW_019168381.1 + View
Durio zibethinus Duzib084G0394 NW_019167827.1 - View
Durio zibethinus Duzib068G0369 NW_019167838.1 + View
Durio zibethinus Duzib084G0067 NW_019167827.1 + View
Erigeron canadensis ECA233G1853 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.K00264 Chr11 + View
Erythranthe guttata Migut.E01104 scaffold_5 - View
Fragaria x ananassa FAN06G0034 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Fvb7-2 + View
Fragaria x ananassa FAN08G2543 PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED Fvb5-3 + View
Fragaria x ananassa FAN01G2393 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Fvb7-4 - View
Fragaria x ananassa FAN18G0282 PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED Fvb5-1 - View
Fragaria x ananassa FAN06G4024 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Fvb7-2 + View
Fragaria x ananassa FAN03G2580 PTHR11588//PTHR11588:SF122 - TUBULIN // SUBFAMILY NOT NAMED Fvb7-3 - View
Fragaria x ananassa FAN10G0403 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria vesca FvH4_7g29550 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Fvb7 + View
Fragaria vesca FvH4_5g02340 PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED Fvb5 - View
Gossypium hirsutum Gohir.D03G151700 PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED D03 + View
Gossypium hirsutum Gohir.D08G199800 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED D08 + View
Gossypium hirsutum Gohir.A08G181100 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED A08 + View
Gossypium hirsutum Gohir.A03G015900 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED A03 + View
Glycine max Glyma.10G235100 PTHR11588//PTHR11588:SF114//PTHR11588:SF122 - TUBULIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED Gm10 - View
Glycine max Glyma.20G159200 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Gm20 + View
Gossypium raimondii Gorai.003G159100 Chr03 + View
Gossypium raimondii Gorai.004G210600 Chr04 + View
Helianthus annuus HanXRQChr09g0253681 Probable tubulin beta-1 chain HanXRQChr09 + View
Hydrangea macrophylla Hma1.2p1_0270F.1_g107960 Hma1.2p1_0270F.1 - View
Lupinus albus Lalb_Chr19g0130801 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Lalb_Chr19 - View
Lactuca sativa Lsat_1_v5_gn_5_111360 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_9 + View
Malus domestica MD01G1201800 tubulin beta 8 Chr01 + View
Malus domestica MD07G1270800 tubulin beta 8 Chr07 + View
Manihot esculenta Manes.06G147900 Chromosome06 + View
Medicago truncatula Medtr8g098360 tubulin beta-1 chain chr8 - View
Medicago truncatula Medtr1g101130 tubulin beta-1 chain chr1 - View
Nelumbo nucifera Nn1g01477 chr1 + View
Punica granatum PGR031G3956 NC_045127.1 + View
Punica granatum PGR142G3538 NC_045128.1 - View
Prunus persica Prupe.2G295200 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Pp02 + View
Pisum sativum Psat7g033520 Beta-tubulin signature chr7LG7 + View
Papaver somniferum PSO478G1101 NC_039361.1 + View
Papaver somniferum PSO782G1414 NC_039365.1 - View
Populus trichocarpa Potri.003G125400 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Chr03 - View
Phaseolus vulgaris Phvul.007G070800 PTHR11588//PTHR11588:SF114 - TUBULIN // SUBFAMILY NOT NAMED Chr07 + View
Rhododendron simsii Rhsim03G0186300 chr03 + View
Striga asiatica SGA_v2.0_scaffold385G50471 scaffold385 + View
Striga asiatica SGA_v2.0_scaffold144G35951 scaffold144 - View
Salvia bowleyana SalBow4G1902 GWHASIU00000008 - View
Salvia bowleyana SalBow4G3106 GWHASIU00000008 - View
Salix brachista Sabra01G0079300 GWHAAZH00000001 + View
Salix brachista Sabra03G0088900 GWHAAZH00000003 - View
Simmondsia chinensis Sc01g0009480 GWHAASQ00000001 + View
Solanum lycopersicum Solyc03g025730.3 Tubulin beta chain (AHRD V3.3 *** A0A1U8FRZ9_CAPAN) SL4.0ch03 - View
Solanum pennellii Sopen03g004550 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. | tubulin beta 8 (TUB8) | CONTAINS InterPro DOMAIN/s: Beta tubulin , Tubulin , Tubulin/FtsZ, GTPase domain , Tubulin/FtsZ, N-terminal , Tubulin/FtsZ, C-terminal , Beta tubulin, autoregulation binding site , Tubulin, conserved site , Tubulin/FtsZ, 2-layer sandwich domain | BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 ., Tubulin beta-2 chain (Beta-2 tubulin) - Oryza sativa (Rice), Tubulin/FtsZ, GTPase domain Spenn-ch03 - View
Selenicereus undatus Hund14792 Scaffold_33677 + View
Trochodendron aralioides TAR629G0627 group0 + View
Trochodendron aralioides TAR636G2438 group1 + View
Trochodendron aralioides TAR374G0773 group12 + View
Trochodendron aralioides TAR375G0230 group15 + View
Theobroma cacao Thecc.03G177700 Tubulin beta 8 Chromosome_3 + View
Theobroma cacao Thecc.03G276700 Tubulin beta 8 Chromosome_3 + View
Tripterygium wilfordii TWI60G1566 NC_052246.1 - View
Tripterygium wilfordii TWI15G0678 NC_052247.1 - View
Tripterygium wilfordii TWI14G0573 NC_052249.1 + View
Vaccinium macrocarpon vmacro13955 Similar to TUBB1: Tubulin beta-1 chain (Zea mays OX%3D4577) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro11313 Similar to TUBB8: Tubulin beta-8 chain (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro06672 Similar to TUBB8: Tubulin beta-8 chain (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01028948001 chr16 + View