Gene: SGA_v2.0_scaffold144G35951
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold144G35951
- Transcript Identifier SGA_v2.0_scaffold144T35951
- Gene Type Coding gene
- Location scaffold144 : 740929-747558 : negative
Gene Family Information
- ID HOM05D000282
- #Genes/#Species 1541/100
- Phylogenetic origin
- ID ORTHO05D000272
- #Genes/#Species 1231/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Tubulin beta chain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G20890 |
| GO:0006979 | IEA | InterPro | response to oxidative stress | |
| GO:0007017 | IEA | InterPro | microtubule-based process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G44340 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G44340 |
| GO:0005200 | IEA | InterPro | structural constituent of cytoskeleton | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0004602 | IEA | InterPro | glutathione peroxidase activity | |
| GO:0005525 | IEA | InterPro | GTP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G44340 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT4G20890 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G44340 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G44340 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G44340 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G44340 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G20890 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G44340 |
| GO:0005874 | IEA | InterPro | microtubule |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain |
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily |
| IPR008280 | Tubulin/FtsZ, C-terminal |
| IPR002453 | Beta tubulin |
| IPR000889 | Glutathione peroxidase |
| IPR000217 | Tubulin |
| IPR003008 | Tubulin/FtsZ, GTPase domain |
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain |
| IPR036249 | Thioredoxin-like superfamily |
| IPR023123 | Tubulin, C-terminal |