Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G2990 LG-4 - View
Acer truncatum Atru.chr1.3950 chr1 - View
Actinidia chinensis Actinidia39082 Lachesis_group9 - View
Actinidia chinensis Actinidia26030 Lachesis_group2 - View
Arabidopsis lyrata AL1G29720 scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T5SCHP PF03847 - Transcription initiation factor TFIID subunit A (TFIID_20kDa) arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U78AI9 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT1G17440 Transcription initiation factor TFIID subunit A Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response%2C including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression. Cytokinin-hypersensitive 1 (CKH1) mutants are characterized by rapidly growing calli with a green color at low levels of cytokinins%2C which are insufficient to induce such cytokinin responses in wild-type explants. It is hypothesized that CKH1 acts as a negative regulator of cytokinin signaling in Arabidopsis. ENHANCED ETHYLENE RESPONSE 4 (EER4)%3B FUNCTIONS IN: transcription initiation factor activity%2C DNA binding%3B INVOLVED IN: regulation of ethylene mediated signaling pathway%2C jasmonic acid mediated signaling pathway%2C transcription initiation%3B LOCATED IN: nucleus%2C transcription factor TFIID complex%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228)%2C Histone-fold (InterPro:IPR009072)%3B BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 (TAIR:AT3G10070.1)%3B Has 83508 Blast hits to 36935 proteins in 1541 species: Archae - 40%3B Bacteria - 5554%3B Metazoa - 31214%3B Fungi - 9645%3B Plants - 6795%3B Viruses - 322%3B Other Eukaryotes - 29938 (source: NCBI BLink). Chr1 - View
Capsicum annuum CAN.G825.8 PGAv.1.6.scaffold825 - View
Cannabis sativa CANSAT56G2749 NC_044371.1 + View
Cicer arietinum L. Ca_23371_v3 Ca_LG7_v3 + View
Corylus avellana Haze_16027 Similar to TAF12B: Transcription initiation factor TFIID subunit 12b (Arabidopsis thaliana OX%3D3702) 11 + View
Citrus clementina Ciclev10025234m.g scaffold_7 + View
Cardamine hirsuta CARHR018030 Transcription initiation factor TFIID subunit A Chr1 - View
Carya illinoinensis CiPaw.01G219200 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) Chr01 - View
Citrullus lanatus ClCG09G000950 Transcription initiation factor TFIID subunit A LENGTH=683 CG_Chr09 + View
Cucumis melo MELO3C024357.2 transcription initiation factor TFIID subunit 12b chr01 - View
Carica papaya Cpa.g.sc25.112 supercontig_25 + View
Capsella rubella Carub.0001s1720 PTHR12264:SF3 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B scaffold_1 - View
Cucumis sativus L. CsaV3_7G034500 transcription initiation factor TFIID subunit 12b chr7 - View
Daucus carota DCAR_016127 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv37872 GWHABJS00000006 + View
Davidia involucrata Dinv20442 GWHABJS00000019 + View
Durio zibethinus Duzib192G0999 NW_019168037.1 - View
Durio zibethinus Duzib235G0745 NW_019167982.1 + View
Erigeron canadensis ECA247G3107 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.F03174 Chr06 + View
Erythranthe guttata Migut.I01070 scaffold_9 + View
Eutrema salsugineum Thhalv10006997m.g PTHR12264:SF3 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B scaffold_5 + View
Fragaria x ananassa FAN09G3304 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) Fvb6-2 - View
Fragaria x ananassa FAN14G0943 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) Fvb6-1 - View
Fragaria x ananassa FAN05G3736 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) Fvb6-3 - View
Fragaria vesca FvH4_6g34640 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) Fvb6 + View
Gossypium hirsutum Gohir.A06G193600 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) A06 + View
Gossypium hirsutum Gohir.D06G201400 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) D06 + View
Gossypium hirsutum Gohir.D10G055000 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) D10 + View
Gossypium hirsutum Gohir.A10G053200 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) A10 + View
Glycine max Glyma.16G006966 Gm16 + View
Glycine max Glyma.07G037600 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) Gm07 + View
Gossypium raimondii Gorai.010G235100 Chr10 + View
Gossypium raimondii Gorai.011G058700 Chr11 + View
Hydrangea macrophylla Hma1.2p1_0291F.1_g115140 Hma1.2p1_0291F.1 - View
Hydrangea macrophylla Hma1.2p1_0496F.1_g166220 Hma1.2p1_0496F.1 + View
Lupinus albus Lalb_Chr04g0263441 PF03847 - Transcription initiation factor TFIID subunit A (TFIID_20kDa) Lalb_Chr04 + View
Lotus japonicus Lj3g0023911 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) chr3 + View
Lonicera japonica Lj5A37T39 GWHAAZE00000005 - View
Lonicera japonica Lj9P523T21 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_1_38060 Lsat_1_v8_lg_1 - View
Malus domestica MD17G1168400 Transcription initiation factor TFIID subunit A Chr17 - View
Malus domestica MD09G1184100 Transcription initiation factor TFIID subunit A Chr09 - View
Manihot esculenta Manes.11G020700 Chromosome11 - View
Manihot esculenta Manes.04G144200 Chromosome04 + View
Medicago truncatula Medtr8g020470 transmembrane protein, putative chr8 + View
Olea europaea Oeu007562.1 scaffold1279 - View
Punica granatum PGR119G0909 NC_045132.1 + View
Prunus persica Prupe.3G042400 PTHR12264:SF3 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B Pp03 - View
Pisum sativum Psat4g182480 Transcription initiation factor TFIID subunit A chr4LG4 - View
Populus trichocarpa Potri.003G064100 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) Chr03 + View
Populus trichocarpa Potri.001G169900 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) Chr01 - View
Phaseolus vulgaris Phvul.010G130700 PTHR12264:SF3 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B Chr10 - View
Quercus lobata QL05p007807 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0145171 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim12G0209500 chr12 + View
Striga asiatica SGA_v2.0_scaffold71G23856 scaffold71 - View
Salvia bowleyana SalBow6G7152 GWHASIU00000002 + View
Salvia bowleyana SalBow6G7196 GWHASIU00000002 + View
Salix brachista Sabra01G0141500 GWHAAZH00000001 + View
Salix brachista Sabra03G0037700 GWHAAZH00000003 + View
Simmondsia chinensis Sc12g0010550 GWHAASQ00000012 + View
Solanum lycopersicum Solyc03g122020.4 Transcription initiation factor TFIID subunit 12 (AHRD V3.3 *** A0A1U8G3D7_CAPAN) SL4.0ch03 + View
Schrenkiella parvula Sp1g15580 K03126 - transcription initiation factor TFIID subunit 12 (TAF12) ch1-1 - View
Solanum pennellii Sopen03g040820 Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression. | ENHANCED ETHYLENE RESPONSE 4 (EER4) | FUNCTIONS IN: DNA binding, transcription initiation factor activity | INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation | LOCATED IN: nucleus, transcription factor TFIID complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID , Histone-fold | BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 Spenn-ch03 + View
Solanum pennellii Sopen06g022350 Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression. | ENHANCED ETHYLENE RESPONSE 4 (EER4) | FUNCTIONS IN: DNA binding, transcription initiation factor activity | INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation | LOCATED IN: nucleus, transcription factor TFIID complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID , Histone-fold | BEST Arabidopsis thaliana protein match is: TBP-associated factor 12 Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG402004858 TATA binding protein associated factor ST4.03ch06 - View
Theobroma cacao Thecc.06G119300 Transcription initiation factor TFIID subunit A Chromosome_6 + View
Tarenaya hassleriana THA.LOC104813958 transcription initiation factor TFIID subunit 12b NW_010965373.1 + View
Trifolium pratense TPR.G32477 Tp57577_TGAC_v2_LG5 - View
Vaccinium macrocarpon vmacro22041 Similar to TAF12B: Transcription initiation factor TFIID subunit 12b (Arabidopsis thaliana OX%3D3702) scaffold00289_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G0210 CM024078.1 + View
Vitis vinifera GSVIVG01016770001 chr9 - View