Gene: PGSC0003DMG402004858

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG402004858
  • Transcript Identifier PGSC0003DMT400012398
  • Gene Type Coding gene
  • Location ST4.03ch06 : 48532271-48534942 : negative

Gene Family Information

  • ID HOM05D002498
  • #Genes/#Species 273/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37450764
  • id PGSC0003DMG402004858.v4.03
  • uniprot M1A173

Descriptions

  • Description TATA binding protein associated factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0051123
IBA
GOA DatabaseRNA polymerase II preinitiation complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IBA
GOA DatabaseDNA binding
GO:0017025
IBA
GOA DatabaseTBP-class protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000124
IEA
GOA DatabaseSAGA complex
GO:0000124
IEA
InterProSAGA complex
GO:0005669
IBA
IEA
GOA Databasetranscription factor TFIID complex
GO:0005669
IEA
InterProtranscription factor TFIID complex
GO:0046695
IEA
GOA DatabaseSLIK (SAGA-like) complex
GO:0046695
IEA
InterProSLIK (SAGA-like) complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037794 Transcription initiation factor TFIID subunit 12
IPR003228 Transcription initiation factor TFIID subunit 12 domain
IPR009072 Histone-fold
Mapman id Description
15.3.4.1.5 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF12