Gene: Sopen03g040820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g040820
  • Transcript Identifier Sopen03g040820.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 74612947-74620754 : positive

Gene Family Information

  • ID HOM05D002498
  • #Genes/#Species 273/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g040820.1

Descriptions

  • Description Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression. | ENHANCED ETHYLENE RESPONSE 4 (EER4) | FUNCTIONS IN: DNA binding, transcription initiation factor activity | INVOLVED IN: regulation of ethylene mediated signaling pathway, jasmonic acid mediated signaling pathway, transcription initiation | LOCATED IN: nucleus, transcription factor TFIID complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID , Histone-fold | BEST Arabidopsis thaliana protein match is: TBP-associated factor 12
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway AT1G17440
GO:0009736
ISO
PLAZA Integrative Orthologycytokinin-activated signaling pathway AT1G17440
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT1G17440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G17440

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000124
IEA
InterProSAGA complex
GO:0005669
IEA
InterProtranscription factor TFIID complex
GO:0046695
IEA
InterProSLIK (SAGA-like) complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G17440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037794 Transcription initiation factor TFIID subunit 12
IPR003228 Transcription initiation factor TFIID subunit 12 domain
IPR009072 Histone-fold
Mapman id Description
15.3.4.1.5 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF12