Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG4G18310 | LG-4 | + | View | |
Aethionema arabicum | Aa31LG1G16130 | LG-1 | - | View | |
Acer truncatum | Atru.chr3.1020 | chr3 | - | View | |
Acer truncatum | Atru.chr5.2331 | chr5 | + | View | |
Actinidia chinensis | Actinidia00365 | Lachesis_group12 | - | View | |
Actinidia chinensis | Actinidia34532 | Lachesis_group15 | + | View | |
Actinidia chinensis | Actinidia11978 | Lachesis_group11 | + | View | |
Arabidopsis lyrata | AL5G29860 | scaffold_5 | + | View | |
Arabidopsis lyrata | AL8G43720 | scaffold_8 | + | View | |
Avicennia marina | MSTRG.23666 | ScioBoG_3895_HRSCAF_3912 | + | View | |
Aquilegia oxysepala | Aqoxy6G02593 | CHR06 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.B6C3DF | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | arahy.Tifrunner.gnm1.Arahy.15 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.WDU6CI | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | arahy.Tifrunner.gnm1.Arahy.05 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.QPJJ3N | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | arahy.Tifrunner.gnm1.Arahy.11 | + | View |
Arabidopsis thaliana | AT5G67580 | Homeodomain-like/winged-helix DNA-binding family protein Encodes a telomeric DNA binding protein. In vitro%2C the protein preferentially binds double-stranded telomeric repeats%2C but it can also bind to the single G-rich telomeric strand. TRB2%3B FUNCTIONS IN: single-stranded telomeric DNA binding%2C DNA binding%2C protein homodimerization activity%2C sequence-specific DNA binding transcription factor activity%2C double-stranded telomeric DNA binding%3B INVOLVED IN: in 8 processes%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C SANT%2C DNA-binding (InterPro:IPR001005)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Homeodomain-like (InterPro:IPR009057)%2C Histone H1/H5 (InterPro:IPR005818)%2C Homeodomain-related (InterPro:IPR012287)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%3B BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1)%3B Has 792 Blast hits to 790 proteins in 134 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 127%3B Fungi - 75%3B Plants - 516%3B Viruses - 0%3B Other Eukaryotes - 72 (source: NCBI BLink). | Chr5 | - | View |
Arabidopsis thaliana | AT3G49850 | telomere repeat binding factor 3 Encodes a telomeric DNA binding protein. In vitro%2C the protein preferentially binds double-stranded telomeric repeats%2C but it can also bind to the single G-rich telomeric strand. telomere repeat binding factor 3 (TRB3)%3B FUNCTIONS IN: single-stranded telomeric DNA binding%2C DNA binding%2C protein homodimerization activity%2C sequence-specific DNA binding transcription factor activity%2C double-stranded telomeric DNA binding%3B INVOLVED IN: in 7 processes%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Histone H1/H5 (InterPro:IPR005818)%2C Myb transcription factor (InterPro:IPR015495)%2C Homeodomain-related (InterPro:IPR012287)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT5G67580.2)%3B Has 536 Blast hits to 530 proteins in 102 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 28%3B Fungi - 59%3B Plants - 395%3B Viruses - 0%3B Other Eukaryotes - 54 (source: NCBI BLink). | Chr3 | + | View |
Brassica carinata | BcaB05g23168 | ChrB05 | + | View | |
Brassica carinata | BcaC09g49979 | ChrC09 | + | View | |
Brassica carinata | BcaB01g00656 | ChrB01 | - | View | |
Brassica carinata | BcaC04g23236 | ChrC04 | - | View | |
Brassica carinata | BcaB04g20043 | ChrB04 | + | View | |
Brassica napus | C01p30440 | C01 | - | View | |
Brassica napus | A03p47550 | A03 | + | View | |
Brassica napus | A06p32840 | A06 | + | View | |
Brassica napus | A09p09260 | A09 | + | View | |
Brassica napus | C03p59630 | C03 | - | View | |
Brassica napus | A01p24420 | A01 | - | View | |
Brassica oleracea | BolC3t18225H | C3 | - | View | |
Brassica oleracea | BolC1t02987H | C1 | - | View | |
Brassica oleracea | BolC8t50108H | C8 | + | View | |
Brassica oleracea | BolC9t53977H | C9 | + | View | |
Brassica rapa | BraA01t02355Z | A01 | - | View | |
Brassica rapa | BraA09t36579Z | A09 | + | View | |
Brassica rapa | BraA06t26216Z | A06 | + | View | |
Capsicum annuum | CAN.G775.7 | PGAv.1.6.scaffold775 | + | View | |
Cannabis sativa | CANSAT01G3285 | NC_044373.1 | - | View | |
Cicer arietinum L. | Ca_24682_v3 | Ca_LG8_v3 | + | View | |
Cicer arietinum L. | Ca_22103_v3 | Ca_LG7_v3 | + | View | |
Corylus avellana | Haze_15277 | Similar to TRB1: Telomere repeat-binding factor 1 (Arabidopsis thaliana OX%3D3702) | 11 | + | View |
Corylus avellana | Haze_10266 | Similar to TRB1: Telomere repeat-binding factor 1 (Arabidopsis thaliana OX%3D3702) | 9 | - | View |
Coffea canephora | Cc07_g07150 | Telomere repeat-binding factor 2 | chr7 | - | View |
Citrus clementina | Ciclev10028926m.g | scaffold_8 | + | View | |
Cardamine hirsuta | CARHR280010 | Single myb histone | Chr8 | + | View |
Cardamine hirsuta | CARHR158930 | Single myb histone | Chr5 | + | View |
Carya illinoinensis | CiPaw.01G004100 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Chr01 | + | View |
Carya illinoinensis | CiPaw.05G018600 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Chr05 | - | View |
Carya illinoinensis | CiPaw.02G001900 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Chr02 | + | View |
Citrullus lanatus | ClCG01G017630 | telomere repeat binding factor 3 LENGTH=295 | CG_Chr01 | - | View |
Cucumis melo | MELO3C007640.2 | telomere repeat-binding factor 2 isoform X1 | chr08 | - | View |
Corchorus olitorius | COL.COLO4_11583 | hypothetical protein | AWUE01014716.1 | - | View |
Carica papaya | Cpa.g.sc6.10 | supercontig_6 | + | View | |
Carica papaya | Cpa.g.sc106.31 | supercontig_106 | + | View | |
Capsella rubella | Carub.0005s1621 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | scaffold_5 | + | View |
Capsella rubella | Carub.0008s2689 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | scaffold_8 | + | View |
Cucumis sativus L. | CsaV3_6G044170 | telomere repeat-binding factor 1-like | chr6 | - | View |
Daucus carota | DCAR_021465 | hypothetical protein | DCARv2_Chr6 | - | View |
Davidia involucrata | Dinv42238 | GWHABJS00000002 | + | View | |
Davidia involucrata | Dinv15813 | GWHABJS00000005 | - | View | |
Davidia involucrata | Dinv26937 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib264G0181 | NW_019167960.1 | + | View | |
Durio zibethinus | Duzib187G1596 | NW_019167860.1 | + | View | |
Durio zibethinus | Duzib052G0250 | NW_019167849.1 | + | View | |
Durio zibethinus | Duzib147G1283 | NW_019168470.1 | + | View | |
Erythranthe guttata | Migut.B00451 | scaffold_2 | - | View | |
Eutrema salsugineum | Thhalv10004691m.g | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | scaffold_6 | - | View |
Eutrema salsugineum | Thhalv10010562m.g | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | scaffold_16 | - | View |
Fragaria x ananassa | FAN28G0894 | PTHR21717//PTHR21717:SF17 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 4-RELATED | Fvb1-1 | + | View |
Fragaria x ananassa | FAN19G1449 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Fvb1-4 | - | View |
Fragaria x ananassa | FAN23G2844 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Fvb1-3 | - | View |
Fragaria x ananassa | FAN26G1448 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Fvb1-2 | - | View |
Fragaria vesca | FvH4_1g17790 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Fvb1 | - | View |
Gossypium hirsutum | Gohir.A03G182000 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | A03 | + | View |
Gossypium hirsutum | Gohir.D02G203700 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | D02 | + | View |
Gossypium hirsutum | Gohir.A02G151200 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | A02 | + | View |
Gossypium hirsutum | Gohir.D11G209000 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | D11 | - | View |
Gossypium hirsutum | Gohir.D03G029100 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | D03 | - | View |
Gossypium hirsutum | Gohir.A11G214400 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | A11 | + | View |
Glycine max | Glyma.05G106000 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Gm05 | - | View |
Glycine max | Glyma.01G194600 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Gm01 | - | View |
Glycine max | Glyma.17G160500 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Gm17 | + | View |
Glycine max | Glyma.11G047300 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Gm11 | + | View |
Gossypium raimondii | Gorai.007G224200 | Chr07 | - | View | |
Gossypium raimondii | Gorai.005G230800 | Chr05 | + | View | |
Lupinus albus | Lalb_Chr09g0323631 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Lalb_Chr09 | - | View |
Lupinus albus | Lalb_Chr16g0378881 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Lalb_Chr16 | - | View |
Lotus japonicus | Lj4g0005827 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | chr4 | - | View |
Lotus japonicus | Lj2g0019460 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | chr2 | + | View |
Lonicera japonica | Lj7C99T13 | GWHAAZE00000007 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_2_82680 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Lsat_1_v8_lg_2 | + | View |
Malus domestica | MD02G1186900 | Homeodomain-like/winged-helix DNA-binding family protein | Chr02 | - | View |
Malus domestica | MD15G1298000 | telomere repeat binding factor 1 | Chr15 | - | View |
Malus domestica | MD10G1106800 | telomere repeat binding factor 1 | Chr10 | - | View |
Manihot esculenta | Manes.13G111100 | Chromosome13 | + | View | |
Manihot esculenta | Manes.12G115100 | Chromosome12 | - | View | |
Medicago truncatula | Medtr5g015340 | MYB transcription factor | chr5 | + | View |
Nelumbo nucifera | Nn1g04540 | chr1 | + | View | |
Nicotiana tabacum | Nitab4.5_0000142g0120 | Homeodomain-like, SANT/Myb domain, Myb domain, Linker histone H1/H5, domain H15, Winged helix-turn-helix DNA-binding domain | Nitab4.5_0000142 | - | View |
Nicotiana tabacum | Nitab4.5_0000036g0090 | Homeodomain-like, Linker histone H1/H5, domain H15, SANT/Myb domain, Myb domain, Winged helix-turn-helix DNA-binding domain | Nitab4.5_0000036 | - | View |
Olea europaea | Oeu032425.1 | scaffold2701 | - | View | |
Olea europaea | Oeu013324.1 | chr18 | - | View | |
Olea europaea | Oeu014250.1 | chr10 | - | View | |
Petunia axillaris | Peaxi162Scf00449g00319 | telomere repeat binding factor 1 | Peaxi162Scf00449 | - | View |
Punica granatum | PGR102G1507 | NC_045129.1 | + | View | |
Prunus persica | Prupe.8G146200 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Pp08 | - | View |
Prunus persica | Prupe.6G219800 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Pp06 | + | View |
Pisum sativum | Psat2g171680 | Linker histone H1 and H5 family | chr2LG1 | - | View |
Pisum sativum | Psat4g081560 | Linker histone H1 and H5 family | chr4LG4 | + | View |
Papaver somniferum | PSO170G1287 | NC_039360.1 | - | View | |
Papaver somniferum | PSO017G0359 | NC_039362.1 | - | View | |
Papaver somniferum | PSO675G7435 | NC_039358.1 | - | View | |
Papaver somniferum | PSO541G0983 | NC_039363.1 | + | View | |
Populus trichocarpa | Potri.007G005000 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Chr07 | - | View |
Populus trichocarpa | Potri.001G292700 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Chr01 | + | View |
Populus trichocarpa | Potri.014G004900 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Chr14 | - | View |
Populus trichocarpa | Potri.009G087000 | PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Chr09 | + | View |
Phaseolus vulgaris | Phvul.003G234600 | Chr03 | + | View | |
Phaseolus vulgaris | Phvul.002G010300 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | Chr02 | + | View |
Quercus lobata | QL06p039525 | 6 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0108241 | RcHm_v2.0_Chr2 | - | View | |
Rhododendron simsii | Rhsim10G0099200 | chr10 | + | View | |
Striga asiatica | SGA_v2.0_scaffold72G24070 | scaffold72 | + | View | |
Striga asiatica | SGA_v2.0_scaffold15G07464 | scaffold15 | - | View | |
Salvia bowleyana | SalBow3G3075 | GWHASIU00000006 | - | View | |
Salix brachista | Sabra16G0182300 | GWHAAZH00000016 | + | View | |
Salix brachista | Sabra14G0004500 | GWHAAZH00000014 | - | View | |
Salix brachista | Sabra09G0066600 | GWHAAZH00000009 | + | View | |
Salix brachista | Sabra07G0003600 | GWHAAZH00000007 | - | View | |
Simmondsia chinensis | Sc16g0002850 | GWHAASQ00000016 | + | View | |
Sechium edule | Sed0014323 | LG10 | - | View | |
Sechium edule | Sed0009800 | LG14 | - | View | |
Solanum lycopersicum | Solyc01g106940.4 | Telomere repeat-binding factor 2 (AHRD V3.3 *-* A0A2G3AVM6_CAPCH) | SL4.0ch01 | + | View |
Schrenkiella parvula | Sp5g12250 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | ch5-1 | - | View |
Schrenkiella parvula | Sp2g29070 | PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED | ch2-4 | + | View |
Solanum pennellii | Sopen01g049220 | Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats. | telomere repeat binding factor 1 (TRB1) | FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding | INVOLVED IN: in 8 processes | LOCATED IN: nucleus, nucleosome | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , SANT, DNA-binding , Myb, DNA-binding , Homeodomain-like , Histone H1/H5 , Homeodomain-related , HTH transcriptional regulator, Myb-type, DNA-binding | BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 | Spenn-ch01 | + | View |
Solanum tuberosum | PGSC0003DMG402003328 | Histone H1.1 | ST4.03ch02 | + | View |
Trochodendron aralioides | TAR628G1060 | group5 | + | View | |
Trochodendron aralioides | TAR625G1229 | group4 | - | View | |
Trochodendron aralioides | TAR376G0109 | group14 | + | View | |
Theobroma cacao | Thecc.01G073300 | Homeodomain-like/winged-helix DNA-binding family protein | Chromosome_1 | - | View |
Theobroma cacao | Thecc.02G118200 | Telomere repeat binding factor 1 | Chromosome_2 | - | View |
Vaccinium macrocarpon | vmacro05413 | Similar to TRB1: Telomere repeat-binding factor 1 (Arabidopsis thaliana OX%3D3702) | chr12_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01037816001 | chr3 | - | View |