Gene: Nitab4.5_0000036g0090

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000036g0090
  • Transcript Identifier Nitab4.5_0000036g0090.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000036 : 154232-162254 : negative

Gene Family Information

  • ID HOM05D001027
  • #Genes/#Species 591/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000036g0090.1
  • SR1-identifier Nta04g08680.1

Descriptions

  • Description Homeodomain-like, Linker histone H1/H5, domain H15, SANT/Myb domain, Myb domain, Winged helix-turn-helix DNA-binding domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003691
IEA
InterProdouble-stranded telomeric DNA binding
GO:0003677
IEA
InterProDNA binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G67580
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G67580
GO:0042162
ISO
PLAZA Integrative Orthologytelomeric DNA binding AT5G67580
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G67580
GO:0043047
ISO
PLAZA Integrative Orthologysingle-stranded telomeric DNA binding Zm00001eb357490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G67580
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G67580
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT5G67580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR044597 Single myb histone 1-6
IPR036390 Winged helix DNA-binding domain superfamily
IPR017930 Myb domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR009057 Homeobox-like domain superfamily
IPR005818 Linker histone H1/H5, domain H15
Mapman id Description
12.3.3.2.1.2.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-recruiting factor (TRB)