Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0046960 unnamed protein product [Vitis vinifera] Chr5 - View
CSS0039438 C2H2 and C2HC zinc fingers superfamily protein [Theobroma cacao] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G3080 LG-5 - View
Actinidia chinensis Actinidia10994 Lachesis_group19 + View
Arabidopsis lyrata AL8G15860 scaffold_8 - View
Avicennia marina MSTRG.15126 ScioBoG_19538_HRSCAF_19626 + View
Aquilegia oxysepala Aqoxy4G00602 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TQHX8C PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5RS65W PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IGV1QM PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H5QJF0 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT5G44160 C2H2-like zinc finger protein nutcracker (NUC)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: primary root apical meristem%2C stem vascular system%2C embryo%2C root%2C embryonic root%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G03840.1)%3B Has 52823 Blast hits to 19358 proteins in 362 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 50211%3B Fungi - 300%3B Plants - 764%3B Viruses - 0%3B Other Eukaryotes - 1548 (source: NCBI BLink). Chr5 + View
Beta vulgaris EL10Ac9g20826 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G1808.6 PGAv.1.6.scaffold1808 + View
Cannabis sativa CANSAT64G1274 NC_044379.1 - View
Cicer arietinum L. Ca_18917_v3 Ca_LG6_v3 + View
Corylus avellana Haze_13257 Similar to MGP: Zinc finger protein MAGPIE (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc05_g07790 Zinc finger protein MAGPIE chr5 - View
Citrus clementina Ciclev10015043m.g scaffold_2 - View
Ceratophyllum demersum CDE10G0820 8 - View
Ceratophyllum demersum CDE10G0130 8 - View
Carpinus fangiana Cfa014667 Cfa06 - View
Cardamine hirsuta CARHR179110 Zinc finger family protein Chr6 - View
Carya illinoinensis CiPaw.03G182500 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr03 - View
Carya illinoinensis CiPaw.04G129300 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr04 - View
Citrullus lanatus ClCG02G002310 Zinc finger family protein CG_Chr02 + View
Cucumis melo MELO3C018864.2 zinc finger protein NUTCRACKER chr01 + View
Cucumis melo MELO3C019330.2 zinc finger protein MAGPIE-like chr11 + View
Chenopodium quinoa AUR62036065 NUC: Zinc finger protein NUTCRACKER C_Quinoa_Scaffold_3416 - View
Capsella rubella Carub.0008s0436 PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED scaffold_8 - View
Cucumis sativus L. CsaV3_7G003130 zinc finger protein NUTCRACKER chr7 - View
Cucumis sativus L. CsaV3_2G034490 zinc finger protein MAGPIE-like chr2 - View
Daucus carota DCAR_013042 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv06851 GWHABJS00000013 - View
Davidia involucrata Dinv04584 GWHABJS00000001 + View
Durio zibethinus Duzib132G0549 NW_019167915.1 - View
Eucalyptus grandis Eucgr.K01062 Chr11 - View
Erythranthe guttata Migut.M00153 scaffold_13 + View
Fragaria x ananassa FAN05G4351 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb6-3 + View
Fragaria x ananassa FAN14G5733 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN02G0187 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb6-4 - View
Fragaria x ananassa FAN09G2011 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb6-2 + View
Fragaria vesca FvH4_6g26760 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb6 - View
Gossypium hirsutum Gohir.D12G144000 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED D12 - View
Gossypium hirsutum Gohir.A12G139500 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED A12 - View
Glycine max Glyma.13G293800 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.06G287200 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm06 + View
Glycine max Glyma.12G118800 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm12 - View
Glycine max Glyma.12G207200 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm12 - View
Gossypium raimondii Gorai.008G155300 Chr08 - View
Lupinus albus Lalb_Chr03g0029671 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Lalb_Chr03 - View
Lupinus albus Lalb_Chr19g0135071 KOG3815 - Transcription factor Doublesex Lalb_Chr19 + View
Lupinus albus Lalb_Chr14g0367181 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Lalb_Chr14 - View
Lotus japonicus Lj3g0015548 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED chr3 + View
Lotus japonicus Lj3g0001553 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED chr3 + View
Magnolia biondii MBI06_g45915_MAGBIO AED:0.11 Chr06 - View
Manihot esculenta Manes.12G086200 Chromosome12 + View
Manihot esculenta Manes.13G141500 Chromosome13 + View
Medicago truncatula Medtr2g090745 C2H2-like zinc finger protein, putative chr2 - View
Nelumbo nucifera Nn1g04251 chr1 - View
Nelumbo nucifera Nn1g06399 chr1 + View
Olea europaea Oeu016005.1 chr23 + View
Petunia axillaris Peaxi162Scf00845g00005 C2H2-like zinc finger protein Peaxi162Scf00845 + View
Punica granatum PGR142G2299 NC_045128.1 + View
Prunus persica Prupe.3G128100 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Pp03 - View
Pisum sativum Psat5g274000 Zinc finger C2H2 type domain profile. chr5LG3 - View
Papaver somniferum PSO675G6655 NC_039358.1 + View
Populus trichocarpa Potri.017G017100 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr17 - View
Populus trichocarpa Potri.007G135000 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr07 + View
Phaseolus vulgaris Phvul.005G099800 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr05 + View
Phaseolus vulgaris Phvul.011G123200 PTHR10593//PTHR10593:SF26 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr11 - View
Quercus lobata QL08p040636 8 - View
Rosa chinensis RcHm_v2.0_Chr2g0128541 RcHm_v2.0_Chr2 + View
Striga asiatica SGA_v2.0_scaffold70G23482 scaffold70 + View
Salvia bowleyana SalBow7G1227 GWHASIU00000005 - View
Salix brachista Sabra17G0013300 GWHAAZH00000017 - View
Simmondsia chinensis Sc12g0003260 GWHAASQ00000012 - View
Sechium edule Sed0022088 LG04 - View
Sechium edule Sed0020343 LG05 + View
Sechium edule Sed0007050 LG05 + View
Solanum lycopersicum Solyc07g053570.4 Zinc finger protein MAGPIE (AHRD V3.3 *** A0A2G2Z473_CAPAN) SL4.0ch07 - View
Solanum pennellii Sopen07g027520 MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. | Magpie (MGP) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400009382 Nucleic acid binding protein ST4.03ch07 + View
Selenicereus undatus Hund07866 Scaffold_33676 + View
Trochodendron aralioides TAR624G0041 group9 + View
Trochodendron aralioides TAR626G1149 group3 - View
Trochodendron aralioides TAR627G0370 group6 + View
Theobroma cacao Thecc.02G187400 C2H2 and C2HC zinc fingers superfamily protein Chromosome_2 - View
Tripterygium wilfordii TWI14G1092 NC_052249.1 + View
Tripterygium wilfordii TWI59G0817 NC_052248.1 - View
Vaccinium macrocarpon vmacro12350 Similar to NUC: Zinc finger protein NUTCRACKER (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0780 CM024079.1 - View
Vigna mungo VMungo1127G0441 CM024076.1 + View
Vanilla planifolia HPP92_023041 Zinc finger protein *** CM028161.1 + View
Vitis vinifera GSVIVG01020612001 chr12 + View