Gene: PGSC0003DMG400009382

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400009382
  • Transcript Identifier PGSC0003DMT400024272
  • Gene Type Coding gene
  • Location ST4.03ch07 : 49782017-49784153 : positive

Gene Family Information

  • ID HOM05D000179
  • #Genes/#Species 2119/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37434715
  • id PGSC0003DMG400009382.v4.03
  • uniprot M1AJS6

Descriptions

  • Description Nucleic acid binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0010075
ISO
PLAZA Integrative Orthologyregulation of meristem growth AT5G44160
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G44160
GO:0008356
ISO
PLAZA Integrative Orthologyasymmetric cell division AT5G44160
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT5G44160
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G44160
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G44160
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G44160
GO:0009939
ISO
PLAZA Integrative Orthologypositive regulation of gibberellic acid mediated signaling pathway AT1G03840
GO:0034504
ISO
PLAZA Integrative Orthologyprotein localization to nucleus AT5G44160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IBA
GOA DatabaseDNA-binding transcription factor activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G44160
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G03840
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44160
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT5G44160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)