Gene: Sopen07g027520

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g027520
  • Transcript Identifier Sopen07g027520.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 73180785-73182898 : negative

Gene Family Information

  • ID HOM05D000179
  • #Genes/#Species 2119/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g027520.1

Descriptions

  • Description MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. | Magpie (MGP) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010075
ISO
PLAZA Integrative Orthologyregulation of meristem growth AT5G44160
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G44160
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G44160
GO:0008356
ISO
PLAZA Integrative Orthologyasymmetric cell division AT5G44160
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT5G44160
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G44160
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G44160
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G44160
GO:0009939
ISO
PLAZA Integrative Orthologypositive regulation of gibberellic acid mediated signaling pathway AT1G03840
GO:0034504
ISO
PLAZA Integrative Orthologyprotein localization to nucleus AT5G44160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G44160
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G03840
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G44160
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44160
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT5G44160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G44160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)