Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023652 PREDICTED: syntaxin-43 [Nicotiana tomentosiformis] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G1860 LG-5 - View
Aethionema arabicum Aa31LG5G16130 LG-5 + View
Acer truncatum Atru.chr2.131 chr2 + View
Acer truncatum Atru.chr5.1073 chr5 - View
Actinidia chinensis Actinidia27597 Lachesis_group24 + View
Arabidopsis lyrata AL6G50940 scaffold_6 + View
Amaranthus hybridus Ah.15g092930 Syntaxin-41 (AtSYP41) (AtTLG2a) AmaHy_arrow1_Scaffold_15 - View
Arabidopsis thaliana AT4G02195 syntaxin of plants 42 Encodes a member of SYP4 Gene Family that is a plant ortholog of the Tlg2/syntaxin16 Qa-SNARE. Together with SYP43%2C it regulates the secretory and vacuolar transport pathways in the post-Golgi network and maintains the morphology of the Golgi apparatus and TGN and is required for extracellular resistance responses to a fungal pathogen. syntaxin of plants 42 (SYP42)%3B CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727)%2C Syntaxin/epimorphin%2C conserved site (InterPro:IPR006012)%2C t-SNARE (InterPro:IPR010989)%2C Syntaxin%2C N-terminal (InterPro:IPR006011)%3B BEST Arabidopsis thaliana protein match is: syntaxin of plants 41 (TAIR:AT5G26980.2)%3B Has 2124 Blast hits to 2113 proteins in 267 species: Archae - 1%3B Bacteria - 23%3B Metazoa - 914%3B Fungi - 468%3B Plants - 361%3B Viruses - 0%3B Other Eukaryotes - 357 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaB01g02069 ChrB01 + View
Brassica oleracea BolC5t34810H C5 - View
Beta vulgaris EL10Ac7g17591 K08489 - syntaxin 16 (STX16) Chr7_EL10_PGA_scaffold5 + View
Capsicum annuum CAN.G668.35 PGAv.1.6.scaffold668 - View
Corylus avellana Haze_04989 Similar to SYP41: Syntaxin-41 (Arabidopsis thaliana OX%3D3702) 2 + View
Corylus avellana Haze_04093 Similar to SYP41: Syntaxin-41 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc02_g34600 Syntaxin-43 chr2 + View
Citrus clementina Ciclev10024493m.g scaffold_3 + View
Citrus clementina Ciclev10001826m.g scaffold_5 + View
Ceratophyllum demersum CDE05G0734 3 + View
Ceratophyllum demersum CDE11G0912 9 + View
Carpinus fangiana Cfa005860 Cfa02 - View
Carpinus fangiana Cfa006678 Cfa02 + View
Carya illinoinensis CiPaw.08G157600 K08489 - syntaxin 16 (STX16) Chr08 - View
Carya illinoinensis CiPaw.07G026700 PTHR19957//PTHR19957:SF108 - SYNTAXIN // SUBFAMILY NOT NAMED Chr07 + View
Carya illinoinensis CiPaw.07G113500 K08489 - syntaxin 16 (STX16) Chr07 + View
Citrullus lanatus ClCG09G005420 Syntaxin 42 family protein CG_Chr09 - View
Cucumis melo MELO3C015953.2 syntaxin-42 isoform X1 chr01 - View
Corchorus olitorius COL.COLO4_23289 hypothetical protein AWUE01018179.1 - View
Carica papaya Cpa.g.sc48.131 supercontig_48 + View
Carica papaya Cpa.g.sc151.43 supercontig_151 + View
Chenopodium quinoa AUR62000704 SYP43: Syntaxin-43 C_Quinoa_Scaffold_2088 + View
Chenopodium quinoa AUR62005255 SYP43: Syntaxin-43 C_Quinoa_Scaffold_3820 + View
Chenopodium quinoa AUR62008732 SYP41: Syntaxin-41 C_Quinoa_Scaffold_1710 + View
Chenopodium quinoa AUR62025504 SYP41: Syntaxin-41 C_Quinoa_Scaffold_2773 - View
Capsella rubella Carub.0006s3497 K08489 - syntaxin 16 (STX16) scaffold_6 + View
Cucumis sativus L. CsaV3_7G029670 Syntaxin chr7 + View
Davidia involucrata Dinv33087 GWHABJS00000010 + View
Davidia involucrata Dinv30859 GWHABJS00000002 + View
Davidia involucrata Dinv24416 GWHABJS00000005 - View
Durio zibethinus Duzib138G0267 NW_019167893.1 - View
Durio zibethinus Duzib177G0533 NW_019168004.1 + View
Durio zibethinus Duzib128G0710 NW_019168481.1 - View
Durio zibethinus Duzib133G0648 NW_019167938.1 - View
Gossypium hirsutum Gohir.A11G271300 PTHR19957//PTHR19957:SF108 - SYNTAXIN // SUBFAMILY NOT NAMED A11 + View
Gossypium hirsutum Gohir.A13G111350 K08489 - syntaxin 16 (STX16) A13 + View
Gossypium hirsutum Gohir.D11G117150 PTHR19957//PTHR19957:SF108 - SYNTAXIN // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.A11G112400 K08489 - syntaxin 16 (STX16) A11 - View
Gossypium hirsutum Gohir.D11G281500 PTHR19957//PTHR19957:SF108 - SYNTAXIN // SUBFAMILY NOT NAMED D11 + View
Glycine max Glyma.03G217400 K08489 - syntaxin 16 (STX16) Gm03 + View
Glycine max Glyma.19G214000 K08489 - syntaxin 16 (STX16) Gm19 + View
Gossypium raimondii Gorai.007G125500 Chr07 + View
Gossypium raimondii Gorai.007G303900 Chr07 + View
Hydrangea macrophylla Hma1.2p1_0212F.1_g090200 Hma1.2p1_0212F.1 - View
Lotus japonicus Lj1g0001402 K08489 - syntaxin 16 (STX16) chr1 + View
Lonicera japonica Lj5C342T11 GWHAAZE00000005 - View
Magnolia biondii MBI19_g14286_MAGBIO AED:0.24 Chr19 + View
Magnolia biondii MBI18_g05908_MAGBIO AED:0.17 Chr18 + View
Malus domestica MD12G1209100 syntaxin of plants 43 Chr12 - View
Malus domestica MD04G1196100 syntaxin of plants 43 Chr04 - View
Manihot esculenta Manes.09G174700 Chromosome09 + View
Manihot esculenta Manes.01G223800 Chromosome01 + View
Medicago truncatula Medtr1g083790 syntaxin of plants protein chr1 + View
Medicago truncatula Medtr7g109165 syntaxin of plants protein chr7 + View
Nelumbo nucifera Nn3g21595 chr3 + View
Nelumbo nucifera Nn4g25690 chr4 - View
Nicotiana tabacum Nitab4.5_0000116g0200 t-SNARE Nitab4.5_0000116 - View
Petunia axillaris Peaxi162Scf00073g00129 Syntaxin-43 Peaxi162Scf00073 + View
Petunia axillaris Peaxi162Scf00001g00312 syntaxin of plants 43 Peaxi162Scf00001 - View
Punica granatum PGR083G1333 NC_045133.1 - View
Prunus persica Prupe.6G316200 K08489 - syntaxin 16 (STX16) Pp06 - View
Pisum sativum Psat3g021120 SNARE domain chr3LG5 - View
Populus trichocarpa Potri.013G011100 K08489 - syntaxin 16 (STX16) Chr13 - View
Populus trichocarpa Potri.005G020800 K08489 - syntaxin 16 (STX16) Chr05 - View
Populus trichocarpa Potri.002G200400 K08489 - syntaxin 16 (STX16) Chr02 - View
Phaseolus vulgaris Phvul.001G210900 K08489 - syntaxin 16 (STX16) Chr01 + View
Phaseolus vulgaris Phvul.007G199700 K08489 - syntaxin 16 (STX16) Chr07 + View
Quercus lobata QL12p028673 12 + View
Rosa chinensis RcHm_v2.0_Chr3g0456681 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim05G0134300 chr05 - View
Salix brachista Sabra05G0026800 GWHAAZH00000005 - View
Salix brachista Sabra13G0009800 GWHAAZH00000013 - View
Simmondsia chinensis Sc05g0003420 GWHAASQ00000005 + View
Sechium edule Sed0005074 LG07 - View
Solanum lycopersicum Solyc09g075530.3 Syntaxin (AHRD V3.3 *** A0A2G3BWC1_CAPCH) SL4.0ch09 + View
Solanum lycopersicum Solyc01g100170.3 Syntaxin (AHRD V3.3 *** A0A2G3AXP6_CAPCH) SL4.0ch01 + View
Schrenkiella parvula Sp6g02080 K08489 - syntaxin 16 (STX16) ch6-1 - View
Solanum pennellii Sopen01g043660 member of SYP4 Gene Family | syntaxin of plants 43 (SYP43) | FUNCTIONS IN: SNAP receptor activity | INVOLVED IN: intracellular protein transport, cellular membrane fusion | LOCATED IN: membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain , t-SNARE , Syntaxin/epimorphin, conserved site , Syntaxin, N-terminal | BEST Arabidopsis thaliana protein match is: syntaxin of plants 41 Spenn-ch01 + View
Solanum pennellii Sopen09g030320 member of SYP4 Gene Family | syntaxin of plants 43 (SYP43) | FUNCTIONS IN: SNAP receptor activity | INVOLVED IN: intracellular protein transport, cellular membrane fusion | LOCATED IN: membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain , t-SNARE , Syntaxin/epimorphin, conserved site , Syntaxin, N-terminal | BEST Arabidopsis thaliana protein match is: syntaxin of plants 41 Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400031799 Syntaxin ST4.03ch09 + View
Solanum tuberosum PGSC0003DMG400024732 Syntaxin ST4.03ch01 + View
Trochodendron aralioides TAR365G0165 group16 - View
Trochodendron aralioides TAR636G0565 group1 - View
Theobroma cacao Thecc.05G319400 Syntaxin of plants 43 Chromosome_5 + View
Theobroma cacao Thecc.01G307500 Syntaxin of plants 42 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104801293 syntaxin-42 NW_010969548.1 + View
Trifolium pratense TPR.G9608 Tp57577_TGAC_v2_LG6 - View
Vigna mungo VMungo1383G0689 CM024070.1 + View
Vitis vinifera GSVIVG01031201001 chr14 - View
Vitis vinifera GSVIVG01028068001 chr7 + View