Gene: Sopen09g030320
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g030320
- Transcript Identifier Sopen09g030320.1
- Gene Type Coding gene
- Location Spenn-ch09 : 78707236-78711055 : positive
Gene Family Information
- ID HOM05D002869
- #Genes/#Species 242/99
- Phylogenetic origin
- ID ORTHO05D003080
- #Genes/#Species 245/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g030320.1
Descriptions
- Description member of SYP4 Gene Family | syntaxin of plants 43 (SYP43) | FUNCTIONS IN: SNAP receptor activity | INVOLVED IN: intracellular protein transport, cellular membrane fusion | LOCATED IN: membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain , t-SNARE , Syntaxin/epimorphin, conserved site , Syntaxin, N-terminal | BEST Arabidopsis thaliana protein match is: syntaxin of plants 41
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0061025 | ISO | PLAZA Integrative Orthology | membrane fusion | AT4G02195 |
| GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | AT4G02195 |
| GO:0007030 | ISO | PLAZA Integrative Orthology | Golgi organization | AT4G02195 |
| GO:0007034 | ISO | PLAZA Integrative Orthology | vacuolar transport | AT4G02195 |
| GO:0006886 | ISO | PLAZA Integrative Orthology | intracellular protein transport | AT4G02195 |
| GO:0009306 | ISO | PLAZA Integrative Orthology | protein secretion | AT4G02195 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G02195 |
| GO:0005484 | ISO | PLAZA Integrative Orthology | SNAP receptor activity | AT4G02195 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT4G02195 |
| GO:0030140 | ISO | PLAZA Integrative Orthology | trans-Golgi network transport vesicle | AT4G02195 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.5.1.1.4 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP4-group component |