Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG2G60 | LG-2 | - | View | |
Acer truncatum | Atru.chr6.3240 | chr6 | - | View | |
Acer truncatum | Atru.chr10.2279 | chr10 | + | View | |
Actinidia chinensis | Actinidia02336 | Lachesis_group20 | - | View | |
Actinidia chinensis | Actinidia26883 | Lachesis_group0 | - | View | |
Arabidopsis lyrata | AL2G13540 | scaffold_2 | + | View | |
Avicennia marina | MSTRG.14625 | ScioBoG_18782_HRSCAF_18867 | + | View | |
Avicennia marina | MSTRG.13129 | ScioBoG_17730_HRSCAF_17811 | + | View | |
Avicennia marina | MSTRG.16008 | ScioBoG_19538_HRSCAF_19626 | + | View | |
Amaranthus hybridus | Ah.09g234520 | Homeobox protein knotted-1-like LET6 | AmaHy_arrow1_Scaffold_9 | + | View |
Aquilegia oxysepala | Aqoxy1G02951 | CHR01 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.EUX0L6 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | arahy.Tifrunner.gnm1.Arahy.07 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.FN3HAQ | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | arahy.Tifrunner.gnm1.Arahy.11 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.VD5ZG0 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | arahy.Tifrunner.gnm1.Arahy.04 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.EP4LC1 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | arahy.Tifrunner.gnm1.Arahy.14 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.Z81W9B | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | arahy.Tifrunner.gnm1.Arahy.01 | - | View |
Arabidopsis thaliana | AT1G62360 | KNOX/ELK homeobox transcription factor Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia. SHOOT MERISTEMLESS (STM)%3B CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541)%2C ELK (InterPro:IPR005539)%2C Homeobox (InterPro:IPR001356)%2C Homeobox%2C conserved site (InterPro:IPR017970)%2C KNOX1 (InterPro:IPR005540)%2C Homeodomain-like (InterPro:IPR009057)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana (TAIR:AT4G08150.1)%3B Has 6066 Blast hits to 6064 proteins in 384 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1706%3B Fungi - 298%3B Plants - 3900%3B Viruses - 0%3B Other Eukaryotes - 162 (source: NCBI BLink). | Chr1 | - | View |
Brassica carinata | BcaC04g22393 | ChrC04 | - | View | |
Brassica carinata | BcaC02g10476 | ChrC02 | + | View | |
Brassica carinata | BcaC06g31896 | ChrC06 | - | View | |
Brassica carinata | BcaB07g31318 | ChrB07 | - | View | |
Brassica napus | A09p16330 | A09 | + | View | |
Brassica napus | C09p19820 | C09 | + | View | |
Brassica oleracea | BolC9t54887H | C9 | + | View | |
Brassica rapa | BraA09t37271Z | A09 | + | View | |
Beta vulgaris | EL10Ac8g20128 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr8_EL10_PGA_scaffold4 | - | View |
Capsicum annuum | CAN.G1014.46 | PGAv.1.6.scaffold1014 | + | View | |
Cannabis sativa | CANSAT56G3935 | NC_044371.1 | + | View | |
Cicer arietinum L. | Ca_00692_v3 | Ca_LG1_v3 | - | View | |
Corylus avellana | Haze_12781 | Similar to H1: Homeobox protein SBH1 (Glycine max OX%3D3847) | 5 | + | View |
Coffea canephora | Cc09_g01190 | Homeodomain protein ARBORKNOX1 | chr9 | + | View |
Citrus clementina | Ciclev10015818m.g | scaffold_2 | - | View | |
Citrus clementina | Ciclev10015581m.g | scaffold_2 | - | View | |
Ceratophyllum demersum | CDE07G0209 | 5 | + | View | |
Carpinus fangiana | Cfa000162 | Cfa01 | + | View | |
Cardamine hirsuta | CARHR049560 | Homeobox protein knotted-1, putative | Chr2 | + | View |
Carya illinoinensis | CiPaw.03G156800 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr03 | + | View |
Carya illinoinensis | CiPaw.10G074400 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr10 | - | View |
Carya illinoinensis | CiPaw.04G111400 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr04 | + | View |
Carya illinoinensis | CiPaw.09G098000 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr09 | - | View |
Citrullus lanatus | ClCG01G021690 | Homeobox transcription factor KN3 | CG_Chr01 | + | View |
Cucumis melo | MELO3C007417.2 | homeobox protein knotted-1-like LET6 | chr08 | - | View |
Corchorus olitorius | COL.COLO4_31831 | hypothetical protein | AWUE01020876.1 | - | View |
Carica papaya | Cpa.g.sc152.56 | supercontig_152 | - | View | |
Chenopodium quinoa | AUR62021901 | LET6: Homeobox protein knotted-1-like LET6 | C_Quinoa_Scaffold_1862 | + | View |
Chenopodium quinoa | AUR62012757 | LET6: Homeobox protein knotted-1-like LET6 | C_Quinoa_Scaffold_2715 | - | View |
Capsella rubella | Carub.0002s0262 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | scaffold_2 | + | View |
Cucumis sativus L. | CsaV3_6G048730 | Homeobox protein knotted-1, putative | chr6 | + | View |
Daucus carota | DCAR_002201 | hypothetical protein | DCARv2_Chr1 | - | View |
Daucus carota | DCAR_030892 | hypothetical protein | DCARv2_Chr9 | + | View |
Davidia involucrata | Dinv20105 | GWHABJS00000020 | - | View | |
Davidia involucrata | Dinv13938 | GWHABJS00000016 | - | View | |
Davidia involucrata | Dinv39740 | GWHABJS00000001 | - | View | |
Davidia involucrata | Dinv08733 | GWHABJS00000013 | + | View | |
Durio zibethinus | Duzib235G0652 | NW_019167982.1 | - | View | |
Durio zibethinus | Duzib192G1076 | NW_019168037.1 | + | View | |
Erigeron canadensis | ECA236G0439 | Conyza_canadensis_scaffold:3 | + | View | |
Eucalyptus grandis | Eucgr.D01364 | Chr04 | - | View | |
Erythranthe guttata | Migut.H01590 | scaffold_8 | - | View | |
Eutrema salsugineum | Thhalv10023520m.g | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | scaffold_8 | + | View |
Fragaria x ananassa | FAN02G4033 | PTHR11850//PTHR11850:SF112 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED | Fvb6-4 | + | View |
Fragaria x ananassa | FAN05G1191 | PTHR11850//PTHR11850:SF112 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED | Fvb6-3 | - | View |
Fragaria x ananassa | FAN21G0731 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Fvb3-2 | - | View |
Fragaria x ananassa | FAN14G4462 | PTHR11850//PTHR11850:SF112 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED | Fvb6-1 | - | View |
Fragaria x ananassa | FAN09G1072 | PF03789//PF05920 - ELK domain (ELK) // Homeobox KN domain (Homeobox_KN) | Fvb6-2 | - | View |
Fragaria x ananassa | FAN25G3376 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Fvb3-1 | - | View |
Fragaria vesca | FvH4_6g42570 | PTHR11850//PTHR11850:SF112 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED | Fvb6 | + | View |
Fragaria vesca | FvH4_3g01400 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Fvb3 | + | View |
Gossypium hirsutum | Gohir.D10G010600 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | D10 | + | View |
Gossypium hirsutum | Gohir.D06G157300 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | D06 | - | View |
Gossypium hirsutum | Gohir.A06G151100 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | A06 | - | View |
Gossypium hirsutum | Gohir.A10G011000 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | A10 | + | View |
Gossypium hirsutum | Gohir.A05G173100 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | A05 | - | View |
Gossypium hirsutum | Gohir.D05G176100 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | D05 | - | View |
Glycine max | Glyma.07G263600 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Gm07 | - | View |
Glycine max | Glyma.17G010200 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Gm17 | + | View |
Glycine max | Glyma.09G007500 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Gm09 | - | View |
Glycine max | Glyma.15G111900 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Gm15 | - | View |
Gossypium raimondii | Gorai.010G183800 | Chr10 | - | View | |
Gossypium raimondii | Gorai.011G011700 | Chr11 | + | View | |
Gossypium raimondii | Gorai.009G181500 | Chr09 | - | View | |
Helianthus annuus | HanXRQChr16g0516911 | Putative ELK domain; KNOX1; KNOX2; Homeodomain-like | HanXRQChr16 | + | View |
Helianthus annuus | HanXRQChr15g0470571 | Putative ELK domain; KNOX1; KNOX2; Homeodomain-like | HanXRQChr15 | - | View |
Hydrangea macrophylla | Hma1.2p1_0298F.1_g117470 | Hma1.2p1_0298F.1 | + | View | |
Lupinus albus | Lalb_Chr15g0087751 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Lalb_Chr15 | - | View |
Lupinus albus | Lalb_Chr20g0118951 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Lalb_Chr20 | - | View |
Lotus japonicus | Lj6g0027145 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | chr6 | - | View |
Lotus japonicus | Lj4g0001811 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | chr4 | - | View |
Lonicera japonica | Lj2A264G31 | GWHAAZE00000002 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_4_61641 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Lsat_1_v8_lg_4 | - | View |
Lactuca sativa | Lsat_1_v5_gn_7_15020 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Lsat_1_v8_lg_7 | + | View |
Malus domestica | MD10G1326500 | KNOX/ELK homeobox transcription factor | Chr10 | - | View |
Malus domestica | MD05G1352500 | KNOX/ELK homeobox transcription factor | Chr05 | - | View |
Malus domestica | MD09G1112500 | KNOX/ELK homeobox transcription factor | Chr09 | - | View |
Malus domestica | MD17G1102600 | KNOX/ELK homeobox transcription factor | Chr17 | - | View |
Manihot esculenta | Manes.16G003000 | Chromosome16 | + | View | |
Manihot esculenta | Manes.17G027300 | Chromosome17 | + | View | |
Medicago truncatula | Medtr2g024390 | homeobox knotted-like protein | chr2 | - | View |
Nelumbo nucifera | Nn1g03393 | chr1 | + | View | |
Nelumbo nucifera | Nn1g07273 | chr1 | - | View | |
Nicotiana tabacum | Nitab4.5_0001409g0250 | ELK, KNOX2, Homeobox KN domain, Homeobox domain, KNOX1, Homeodomain-like, Homeobox, conserved site | Nitab4.5_0001409 | - | View |
Olea europaea | Oeu051884.1 | scaffold601 | + | View | |
Olea europaea | Oeu049696.2 | chr21 | + | View | |
Olea europaea | Oeu007153.1 | chr13 | + | View | |
Olea europaea | Oeu003151.1 | chr6 | - | View | |
Punica granatum | PGR004G1732 | NC_045131.1 | - | View | |
Prunus persica | Prupe.3G212100 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Pp03 | + | View |
Prunus persica | Prupe.4G015200 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Pp04 | + | View |
Papaver somniferum | PSO541G5984 | NC_039363.1 | + | View | |
Papaver somniferum | PSO675G1677 | NC_039358.1 | - | View | |
Populus trichocarpa | Potri.006G270401 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr06 | + | View |
Populus trichocarpa | Potri.011G011101 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr11 | - | View |
Populus trichocarpa | Potri.004G004700 | PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr04 | + | View |
Phaseolus vulgaris | Phvul.006G145800 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr06 | + | View |
Phaseolus vulgaris | Phvul.003G081800 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | Chr03 | - | View |
Quercus lobata | QL08p031058 | 8 | + | View | |
Quercus lobata | QL05p071925 | 5 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0002121 | RcHm_v2.0_Chr5 | + | View | |
Rhododendron simsii | Rhsim13G0150200 | chr13 | + | View | |
Striga asiatica | SGA_v2.0_scaffold89G27485 | scaffold89 | - | View | |
Salvia bowleyana | SalBow8G2959 | GWHASIU00000004 | - | View | |
Salix brachista | Sabra11G0008300 | GWHAAZH00000011 | - | View | |
Salix brachista | Sabra04G0002400 | GWHAAZH00000004 | + | View | |
Simmondsia chinensis | Sc17g0007580 | GWHAASQ00000017 | - | View | |
Simmondsia chinensis | Sc12g0002150 | GWHAASQ00000012 | + | View | |
Sechium edule | Sed0010436 | LG05 | - | View | |
Sechium edule | Sed0016871 | LG14 | + | View | |
Sechium edule | Sed0006486 | LG10 | + | View | |
Solanum lycopersicum | Solyc02g081120.4 | class 1 knotted-like homeodomain protein | SL4.0ch02 | + | View |
Schrenkiella parvula | Sp2g02240 | PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS | ch2-1 | + | View |
Solanum pennellii | Sopen02g025760 | Homeobox protein SBH1 - Glycine max (Soybean), Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia. | SHOOT MERISTEMLESS (STM) | CONTAINS InterPro DOMAIN/s: KNOX2 , ELK , Homeobox , Homeobox, conserved site , KNOX1 , Homeodomain-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana | Spenn-ch02 | + | View |
Solanum tuberosum | PGSC0003DMG400016711 | Homeobox protein knotted-1-like LET6 | ST4.03ch02 | + | View |
Selenicereus undatus | Hund23432 | Scaffold_3410 | + | View | |
Selenicereus undatus | Hund21436 | Scaffold_33680 | - | View | |
Trochodendron aralioides | TAR626G0836 | group3 | + | View | |
Trochodendron aralioides | TAR624G0956 | group9 | - | View | |
Theobroma cacao | Thecc.06G228000 | KNOX/ELK homeobox transcription factor | Chromosome_6 | - | View |
Tarenaya hassleriana | THA.LOC104809671 | homeobox protein SHOOT MERISTEMLESS | NW_010965019.1 | + | View |
Tarenaya hassleriana | THA.LOC104825275 | homeobox protein SHOOT MERISTEMLESS-like | NW_010960187.1 | + | View |
Trifolium pratense | TPR.G13053 | Tp57577_TGAC_v2_LG7 | - | View | |
Tripterygium wilfordii | TWI38G0262 | NC_052252.1 | + | View | |
Tripterygium wilfordii | TWI18G0621 | NC_052241.1 | + | View | |
Tripterygium wilfordii | TWI38G1657 | NC_052252.1 | + | View | |
Vaccinium macrocarpon | vmacro03665 | Similar to H1: Homeobox protein SBH1 (Glycine max OX%3D3847) | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo0540G1546 | CM024075.1 | - | View | |
Vigna mungo | VMungo1215G1263 | CM024074.1 | + | View | |
Vitis vinifera | GSVIVG01030488001 | chr12 | - | View | |
Vitis vinifera | GSVIVG01004811001 | chr10_random | - | View |