Gene: PGSC0003DMG400016711

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400016711
  • Transcript Identifier PGSC0003DMT400043083
  • Gene Type Coding gene
  • Location ST4.03ch02 : 36798479-36802913 : positive

Gene Family Information

  • ID HOM05D000779
  • #Genes/#Species 759/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37429011
  • id PGSC0003DMG400016711.v4.03
  • uniprot M1BE18

Descriptions

  • Description Homeobox protein knotted-1-like LET6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060777
ISO
PLAZA Integrative Orthologycompound leaf morphogenesis Solyc02g081120.4
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance AT1G62360
GO:0009691
ISO
PLAZA Integrative Orthologycytokinin biosynthetic process AT1G62360
GO:0010582
IEA
GOA Databasefloral meristem determinacy
GO:0009934
IEA
GOA Databaseregulation of meristem structural organization
GO:0048440
IEA
GOA Databasecarpel development
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G62360
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0042803
IEA
GOA Databaseprotein homodimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981
IBA
IEA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
IEA
GOA Databaseendosome
GO:0005737
IEA
GOA Databasecytoplasm
GO:0009506
IEA
GOA Databaseplasmodesma
GO:0015630
IEA
GOA Databasemicrotubule cytoskeleton
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005541 KNOX2
IPR005539 ELK domain
IPR009057 Homeobox-like domain superfamily
IPR005540 KNOX1
IPR001356 Homeobox domain
IPR008422 Homeobox KN domain
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)