Gene: Sopen02g025760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g025760
  • Transcript Identifier Sopen02g025760.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 48890217-48894550 : positive

Gene Family Information

  • ID HOM05D000779
  • #Genes/#Species 759/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g025760.1

Descriptions

  • Description Homeobox protein SBH1 - Glycine max (Soybean), Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia. | SHOOT MERISTEMLESS (STM) | CONTAINS InterPro DOMAIN/s: KNOX2 , ELK , Homeobox , Homeobox, conserved site , KNOX1 , Homeodomain-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated Os03g0727000
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT4G08150
GO:0045165
ISO
PLAZA Integrative Orthologycell fate commitment AT4G08150
GO:0060777
ISO
PLAZA Integrative Orthologycompound leaf morphogenesis Solyc02g081120.4
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence Os03g0727000
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT4G08150
GO:0019827
ISO
PLAZA Integrative Orthologystem cell population maintenance AT1G62360
GO:0001708
ISO
PLAZA Integrative Orthologycell fate specification AT4G08150
GO:0010497
ISO
PLAZA Integrative Orthologyplasmodesmata-mediated intercellular transport Zm00001eb055920
GO:0010930
ISO
PLAZA Integrative Orthologynegative regulation of auxin mediated signaling pathway Os03g0727000
GO:0048440
ISO
PLAZA Integrative Orthologycarpel development AT1G62360
GO:0009934
ISO
PLAZA Integrative Orthologyregulation of meristem structural organization AT1G62360
GO:0010582
ISO
PLAZA Integrative Orthologyfloral meristem determinacy AT1G62360
GO:0009691
ISO
PLAZA Integrative Orthologycytokinin biosynthetic process AT1G62360
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb055920
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G62360
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G08150
GO:0003677
IEA
InterProDNA binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding Zm00001eb055920
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity Os03g0727000
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Os03g0727000
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G08150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Zm00001eb055920
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G62360
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G62360
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma Zm00001eb055920
GO:0015630
ISO
PLAZA Integrative Orthologymicrotubule cytoskeleton Zm00001eb055920
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005541 KNOX2
IPR005540 KNOX1
IPR009057 Homeobox-like domain superfamily
IPR005539 ELK domain
IPR008422 Homeobox KN domain
IPR001356 Homeobox domain
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)