Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0021148 Hydroxyproline-rich glycoprotein family protein [Theobroma cacao] Chr7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.3534 chr2 + View
Actinidia chinensis Actinidia32285 Lachesis_group10 - View
Actinidia chinensis Actinidia05060 Lachesis_group19 - View
Arabidopsis lyrata AL7G26080 scaffold_7 + View
Avicennia marina MSTRG.12999 ScioBoG_17730_HRSCAF_17811 + View
Avicennia marina MSTRG.6961 ScioBoG_102840_HRSCAF_103099 + View
Amaranthus hybridus Ah.06g182230 Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 (Protein EXTENSIN-LIKE) (EXT-LIKE) AmaHy_arrow1_Scaffold_6 - View
Aquilegia oxysepala Aqoxy1G04123 CHR01 - View
Arabidopsis thaliana AT4G26750 hydroxyproline-rich glycoprotein family protein Encodes a protein involved in mediating plant responses to pathogenesis. Loss of function mutations have increased susceptibility to bacterial pathogens and are defective in pathogen induced endocytosis and vesicle trafficking. LIP5 physically interacts with SKD1 and that interaction is required for its resistance phenotype. LIP5 is phosphorylated by MPK3 and MPK6%2C both of which are components of the disease resistance pathway. hydroxyproline-rich glycoprotein family protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745)%3B BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr4 - View
Beta vulgaris EL10Ac4g07689 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) Chr4_EL10_PGA_scaffold1 - View
Capsicum annuum CAN.G337.55 PGAv.1.6.scaffold337 - View
Cannabis sativa CANSAT11G2127 NC_044377.1 - View
Cicer arietinum L. Ca_06349_v3 Ca_LG2_v3 + View
Corylus avellana Haze_09747 Similar to LIP5: Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g14340 hydroxyproline-rich glycoprotein family protein chr5 - View
Citrus clementina Ciclev10008309m.g scaffold_1 + View
Ceratophyllum demersum CDE04G3304 2 + View
Carpinus fangiana Cfa020276 Cfa08 - View
Cardamine hirsuta CARHR234370 Vacuolar protein sorting-associated protein VTA1-like protein Chr7 - View
Carya illinoinensis CiPaw.11G194800 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) Chr11 + View
Citrullus lanatus ClCG10G005050 Vacuolar protein sorting-associated protein VTA1-like protein CG_Chr10 - View
Cucumis melo MELO3C014172.2 Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 chr06 - View
Corchorus olitorius COL.COLO4_09738 hypothetical protein AWUE01014267.1 + View
Carica papaya Cpa.g.sc284.2 supercontig_284 - View
Chenopodium quinoa AUR62020339 LIP5: Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 C_Quinoa_Scaffold_1373 - View
Chenopodium quinoa AUR62015884 LIP5: Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 C_Quinoa_Scaffold_1529 + View
Capsella rubella Carub.0007s1409 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) scaffold_7 + View
Cucumis sativus L. CsaV3_3G004730 Vacuolar sorting-associated protein VTA1 chr3 - View
Daucus carota DCAR_016648 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_022591 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv22229 GWHABJS00000001 + View
Davidia involucrata Dinv40796 GWHABJS00000013 - View
Durio zibethinus Duzib170G0122 NW_019167871.1 - View
Durio zibethinus Duzib268G0742 NW_019168270.1 - View
Erigeron canadensis ECA240G0086 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.F03508 Chr06 - View
Erythranthe guttata Migut.H01791 scaffold_8 - View
Erythranthe guttata Migut.M01705 scaffold_13 - View
Eutrema salsugineum Thhalv10025139m.g K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) scaffold_1 + View
Gossypium hirsutum Gohir.A04G011700 KOG0917 - Uncharacterized conserved protein A04 - View
Gossypium hirsutum Gohir.D01G071200 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) D01 + View
Gossypium hirsutum Gohir.A01G084800 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) A01 + View
Gossypium hirsutum Gohir.D05G374900 KOG0917 - Uncharacterized conserved protein D05 + View
Glycine max Glyma.14G018200 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) Gm14 - View
Glycine max Glyma.02G295200 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) Gm02 + View
Gossypium raimondii Gorai.009G443800 Chr09 + View
Gossypium raimondii Gorai.002G093900 Chr02 + View
Helianthus annuus HanXRQChr03g0076881 Putative vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal domain HanXRQChr03 + View
Helianthus annuus HanXRQChr13g0408271 Probable hydroxyproline-rich glycoprotein family protein HanXRQChr13 + View
Hydrangea macrophylla Hma1.2p1_1332F.1_g276150 Hma1.2p1_1332F.1 + View
Lupinus albus Lalb_Chr04g0248131 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) Lalb_Chr04 - View
Lotus japonicus LjContig00272g0009776 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) Contig00272 + View
Lotus japonicus Lj6g0028194 KOG0917 - Uncharacterized conserved protein chr6 - View
Lonicera japonica Lj8A173T72 GWHAAZE00000008 + View
Lonicera japonica Lj1C881T5 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_90720 Lsat_1_v8_lg_9 - View
Manihot esculenta Manes.03G136300 Chromosome03 + View
Medicago truncatula Medtr5g093880 hydroxyproline-rich glycoprotein family protein chr5 + View
Nelumbo nucifera Nn1g03334 chr1 - View
Nelumbo nucifera Nn1g07350 chr1 + View
Nicotiana tabacum Nitab4.5_0004445g0070 Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal domain Nitab4.5_0004445 - View
Nicotiana tabacum Nitab4.5_0001160g0010 Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal domain Nitab4.5_0001160 + View
Olea europaea Oeu054311.1 chr19 + View
Petunia axillaris Peaxi162Scf00235g00721 Vacuolar protein sorting-associated protein VTA1 homolog Peaxi162Scf00235 + View
Pisum sativum Psat2g009920 Vta1 like chr2LG1 + View
Papaver somniferum PSO302G0025 NW_020624820.1 - View
Papaver somniferum PSO210G0227 NC_039359.1 - View
Phaseolus vulgaris Phvul.008G272700 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) Chr08 + View
Quercus lobata QL08p007584 8 + View
Rhododendron simsii Rhsim06G0223700 chr06 + View
Striga asiatica SGA_v2.0_scaffold8G04388 scaffold8 - View
Simmondsia chinensis Sc16g0005720 GWHAASQ00000016 - View
Sechium edule Sed0014032 LG08 - View
Sapria himalayana SHI26566 scaffold60_3140063 - View
Solanum lycopersicum Solyc07g064980.3 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 (AHRD V3.3 *-* A0A2I4DYK6_9ROSI) SL4.0ch07 + View
Schrenkiella parvula Sp7g24730 K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) ch7-4 - View
Solanum pennellii Sopen07g033190 hydroxyproline-rich glycoprotein family protein | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 | BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400022298 Hydroxyproline-rich glycoprotein family protein ST4.03ch07 + View
Selenicereus undatus Hund23196 Scaffold_33680 - View
Trochodendron aralioides TAR627G0180 group6 + View
Trochodendron aralioides TAR629G0374 group0 - View
Trochodendron aralioides TAR624G1027 group9 + View
Theobroma cacao Thecc.07G027900 Hydroxyproline-rich glycoprotein family protein Chromosome_7 - View
Tarenaya hassleriana THA.LOC104811633 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 NW_010965372.1 + View
Tripterygium wilfordii TWI38G0072 NC_052252.1 + View
Tripterygium wilfordii TWI39G0687 NC_052250.1 + View
Vaccinium macrocarpon vmacro22307 Similar to LIP5: Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G1984 CM024073.1 + View
Vitis vinifera GSVIVG01037729001 chr19 + View