Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G14720 LG-9 - View
Arabidopsis lyrata AL6G41450 scaffold_6 + View
Avicennia marina MSTRG.24440 ScioBoG_4088_HRSCAF_4107 + View
Amaranthus hybridus Ah.05g169610 AmaHy_arrow1_Scaffold_5 + View
Aquilegia oxysepala Aqoxy6G00706 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ECYT9B KOG0131 - Splicing factor 3b, subunit 4 arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.60H2PX KOG0131 - Splicing factor 3b, subunit 4 arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DQ4GV3 PTHR24012//PTHR24012:SF477 - FAMILY NOT NAMED // PROTEIN RBD-1 arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X035RS PTHR24012//PTHR24012:SF477 - FAMILY NOT NAMED // PROTEIN RBD-1 arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT4G09040 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: leaf%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Beta vulgaris EL10Ac1g01139 KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Chr1_EL10_PGA_scaffold3 + View
Cicer arietinum L. Ca_16034_v3 Ca_LG5_v3 + View
Corylus avellana Haze_18253 Similar to CP31B: RNA-binding protein CP31B, chloroplastic (Arabidopsis thaliana OX%3D3702) 7 + View
Citrus clementina Ciclev10001605m.g scaffold_5 + View
Carpinus fangiana Cfa017897 Cfa07 - View
Carya illinoinensis CiPaw.12G064600 KOG0131 - Splicing factor 3b, subunit 4 Chr12 + View
Carya illinoinensis CiPaw.11G094600 KOG0105//KOG0106//KOG0131//KOG0144//KOG4206 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B Chr11 + View
Carya illinoinensis CiPaw.16G032600 KOG0105//KOG0106//KOG0130//KOG0131//KOG0144//KOG4210 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Nuclear localization sequence binding protein Chr16 + View
Carya illinoinensis CiPaw.15G045300 KOG0105//KOG0106//KOG0114//KOG0131//KOG0144 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Chr15 + View
Citrullus lanatus ClCG11G014360 RNA-binding protein 5-like protein CG_Chr11 - View
Cucumis melo MELO3C003546.2 31 kDa ribonucleoprotein, chloroplastic chr04 + View
Corchorus olitorius COL.COLO4_11999 hypothetical protein AWUE01014793.1 + View
Chenopodium quinoa AUR62018978 33 kDa ribonucleoprotein, chloroplastic C_Quinoa_Scaffold_3876 - View
Chenopodium quinoa AUR62027819 28 kDa ribonucleoprotein, chloroplastic C_Quinoa_Scaffold_3784 - View
Capsella rubella Carub.0006s2763 scaffold_6 - View
Cucumis sativus L. CsaV3_3G047760 31 kDa ribonucleoprotein, chloroplastic chr3 - View
Daucus carota DCAR_012880 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_008256 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv07079 GWHABJS00000011 - View
Durio zibethinus Duzib093G0467 NW_019167937.1 - View
Erigeron canadensis ECA246G3305 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.B00046 Chr06 + View
Erythranthe guttata Migut.N02875 scaffold_14 + View
Eutrema salsugineum Thhalv10028847m.g PTHR24012:SF477 - PROTEIN RBD-1 scaffold_3 + View
Fragaria x ananassa FAN08G0302 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb5-3 - View
Fragaria x ananassa FAN04G2990 PTHR24012:SF477 - PROTEIN RBD-1 Fvb5-4 + View
Fragaria x ananassa FAN13G0478 PTHR24012//PTHR24012:SF477 - FAMILY NOT NAMED // PROTEIN RBD-1 Fvb5-2 + View
Fragaria x ananassa FAN18G3254 PTHR24012//PTHR24012:SF477 - FAMILY NOT NAMED // PROTEIN RBD-1 Fvb5-1 + View
Fragaria vesca FvH4_5g36390 PTHR24012:SF477 - PROTEIN RBD-1 Fvb5 + View
Glycine max Glyma.04G098600 KOG0105//KOG0106//KOG0114//KOG0130//KOG0131//KOG0144 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Gm04 + View
Glycine max Glyma.06G100200 KOG0105//KOG0106//KOG0131 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 Gm06 + View
Helianthus annuus HanXRQChr05g0163171 Putative nucleotide-binding alpha-beta plait domain HanXRQChr05 - View
Lupinus albus Lalb_Chr05g0215971 KOG0106//KOG0110//KOG0131//KOG4210 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // Nuclear localization sequence binding protein Lalb_Chr05 - View
Lupinus albus Lalb_Chr23g0270221 KOG0106//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 Lalb_Chr23 + View
Lupinus albus Lalb_Chr11g0065251 KOG0106//KOG0121//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) // Splicing factor 3b, subunit 4 Lalb_Chr11 + View
Lotus japonicus Lj1g0017532 KOG0105//KOG0106 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) chr1 + View
Lonicera japonica Lj4A96T44 GWHAAZE00000004 + View
Lonicera japonica Lj4A727T38 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_6_104200 Lsat_1_v8_lg_6 - View
Magnolia biondii MBI06_g03315_MAGBIO AED:0.06 Chr06 - View
Malus domestica MD15G1377200 RNA-binding (RRM/RBD/RNP motifs) family protein Chr15 - View
Malus domestica MD08G1189600 RNA-binding (RRM/RBD/RNP motifs) family protein Chr08 - View
Manihot esculenta Manes.18G063201 Chromosome18 + View
Medicago truncatula Medtr3g099590 RNA recognition motif, a.k.a. RRM, RBD protein chr3 - View
Nelumbo nucifera Nn5g29983 chr5 + View
Olea europaea Oeu029731.1 chr10 + View
Oryza sativa ssp. japonica Os08g0483200 Nucleotide-binding, alpha-beta plait domain containing protein. chr08 - View
Petunia axillaris Peaxi162Scf00139g00013 RNA-binding (RRM/RBD/RNP motifs) family protein Peaxi162Scf00139 - View
Punica granatum PGR031G2006 NC_045127.1 + View
Prunus persica Prupe.1G523800 Pp01 - View
Pisum sativum Psat5g050360 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr5LG3 + View
Papaver somniferum PSO541G2771 NC_039363.1 + View
Papaver somniferum PSO675G4478 NC_039358.1 + View
Populus trichocarpa Potri.005G161000 KOG0105//KOG0106//KOG0131//KOG0144 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Chr05 + View
Phaseolus vulgaris Phvul.009G033600 Chr09 - View
Quercus lobata QL02p002278 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr7g0238361 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim06G0077300 chr06 + View
Striga asiatica SGA_v2.0_scaffold28G11896 scaffold28 + View
Salix brachista Sabra05G0122100 GWHAAZH00000005 + View
Sechium edule Sed0024077 LG13 - View
Solanum lycopersicum Solyc04g074750.3 RNA-binding protein CP33, chloroplastic (AHRD V3.3 *** A0A1J3ILT8_NOCCA) SL4.0ch04 - View
Schrenkiella parvula Sp6g08470 PTHR24012//PTHR24012:SF477 - FAMILY NOT NAMED // PROTEIN RBD-1 ch6-3 + View
Solanum pennellii Sopen04g029720 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400030840 Ribonucleoprotein, chloroplast ST4.03ch04 - View
Selenicereus undatus Hund26993 Scaffold_2055 - View
Trochodendron aralioides TAR381G0467 group11 + View
Theobroma cacao Thecc.08G101100 RNA-binding family protein Chromosome_8 + View
Trifolium pratense TPR.G6340 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI56G0053 NC_052242.1 + View
Vaccinium macrocarpon vmacro21285 Similar to RBM46: Probable RNA-binding protein 46 (Homo sapiens OX%3D9606) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2392 CM024072.1 + View
Vitis vinifera GSVIVG01009091001 chr18 - View