Gene: AT4G09040

General Information

Computational description RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008150	ND	Gene Ontology	biological_process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003729	IDA, HDA IBA	Gene Ontology	mRNA binding	1 2 3
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0003723	IPI	Gene Ontology	RNA binding	4

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009570	IDA	GOA Database	chloroplast stroma
GO:0009570	HDA	Gene Ontology	chloroplast stroma	5
GO:1990904	IBA	Gene Ontology	ribonucleoprotein complex	1
GO:0005737	IBA	Gene Ontology	cytoplasm	1
GO:0005634	ISM, IBA	Gene Ontology	nucleus	1
GO:0009507	IDA, HDA ISM	Gene Ontology	chloroplast	4 6

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000504	RNA recognition motif domain
IPR035979	RNA-binding domain superfamily

Mapman id	Description
35.1	not assigned.annotated