Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0020625 Tetratricopeptide repeat-like superfamily protein isoform 2 [Theobroma cacao] Chr1 + View
CSS0040429 hypothetical protein EUGRSUZ_I007281, partial [Eucalyptus grandis] Contig864 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G14330 LG-6 - View
Acer truncatum Atru.chr3.210 chr3 + View
Actinidia chinensis Actinidia32817 Lachesis_group8 - View
Arabidopsis lyrata AL7G13330 scaffold_7 + View
Avicennia marina MSTRG.23699 ScioBoG_3895_HRSCAF_3912 + View
Amaranthus hybridus Ah.03g146310 Suppressor of RPS4-RLD 1 (Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 5) (AtSNC5) AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E3XCDG PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EHFU3U PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.138YHT KOG0547 - Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E99DR7 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms. Involved in mediating effector-triggered immunity. SUPPRESSOR OF RPS4-RLD 1 (SRFR1)%3B FUNCTIONS IN: protein complex scaffold%3B INVOLVED IN: defense response to bacterium%2C incompatible interaction%2C defense response to bacterium%2C negative regulation of transcription%2C negative regulation of defense response%3B LOCATED IN: nucleus%2C perinuclear region of cytoplasm%2C cytoplasm%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung02055 Contig723 - View
Brassica carinata BcaNung02943 Contig1001 + View
Brassica napus C07p62400 C07 - View
Brassica napus A03p65150 A03 - View
Brassica oleracea BolC7t46655H C7 - View
Brassica rapa BraA03t15573Z A03 - View
Beta vulgaris EL10Ac6g15665 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Chr6_EL10_PGA_scaffold0 + View
Capsicum annuum CAN.G1075.3 PGAv.1.6.scaffold1075 - View
Cannabis sativa CANSAT01G2710 NC_044373.1 + View
Cicer arietinum L. Ca_24712_v3 Ca_LG8_v3 + View
Corylus avellana Haze_15324 Similar to SRFR1: Suppressor of RPS4-RLD 1 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc07_g06700 Putative Tetratricopeptide repeat protein 13 chr7 - View
Citrus clementina Ciclev10024760m.g scaffold_7 - View
Carpinus fangiana Cfa004090 Cfa01 - View
Cardamine hirsuta CARHR245860 Tetratricopeptide repeat (TPR)-like superfamily protein Chr7 - View
Carya illinoinensis CiPaw.01G008100 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Chr01 + View
Cucumis melo MELO3C007603.2 Suppressor of RPS4-RLD 1 chr08 - View
Carica papaya Cpa.g.sc6.59 supercontig_6 + View
Chenopodium quinoa AUR62003963 SRFR1: Suppressor of RPS4-RLD 1 C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62038275 SRFR1: Suppressor of RPS4-RLD 1 C_Quinoa_Scaffold_3452 - View
Capsella rubella Carub.0007s0282 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED scaffold_7 + View
Cucumis sativus L. CsaV3_6G043790 Tetratricopeptide repeat protein 13-like chr6 - View
Daucus carota DCAR_010836 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv26891 GWHABJS00000014 - View
Davidia involucrata Dinv30059 GWHABJS00000507 - View
Durio zibethinus Duzib264G0118 NW_019167960.1 + View
Durio zibethinus Duzib187G0681 NW_019167860.1 + View
Durio zibethinus Duzib147G1627 NW_019168470.1 + View
Erigeron canadensis ECA238G2979 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.I00728 Chr09 + View
Erythranthe guttata Migut.H00376 scaffold_8 + View
Fragaria x ananassa FAN28G1348 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Fvb1-1 + View
Fragaria x ananassa FAN19G1580 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Fvb1-4 - View
Fragaria x ananassa FAN23G2362 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Fvb1-3 - View
Fragaria x ananassa FAN26G1585 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Fvb1-2 + View
Fragaria vesca FvH4_1g17100 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Fvb1 - View
Gossypium hirsutum Gohir.D11G205500 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED D11 - View
Gossypium hirsutum Gohir.A11G217900 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED A11 + View
Glycine max Glyma.17G164600 PF00515//PF13371//PF13414 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) Gm17 + View
Glycine max Glyma.05G102400 PF00515//PF13371//PF13414 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) Gm05 - View
Glycine max Glyma.01G191100 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.11G051067 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Gm11 + View
Gossypium raimondii Gorai.007G220700 Chr07 - View
Lupinus albus Lalb_Chr16g0389061 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Lalb_Chr16 - View
Lupinus albus Lalb_Chr05g0226061 KOG0547//KOG0550 - Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 // Molecular chaperone (DnaJ superfamily) Lalb_Chr05 + View
Lotus japonicus Lj4g0015306 KOG4234 - TPR repeat-containing protein chr4 - View
Lotus japonicus Lj2g0010110 KOG0548//KOG0550 - Molecular co-chaperone STI1 // Molecular chaperone (DnaJ superfamily) chr2 + View
Lonicera japonica Lj4C159G2 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_2_83581 Lsat_1_v8_lg_2 + View
Malus domestica MD15G1292200 Tetratricopeptide repeat (TPR)-like superfamily protein Chr15 - View
Malus domestica MD02G1181200 Tetratricopeptide repeat (TPR)-like superfamily protein Chr02 - View
Manihot esculenta Manes.12G112800 Chromosome12 + View
Medicago truncatula Medtr5g016190 suppressor of RPS4-RLD 1/TPR domain protein chr5 + View
Nelumbo nucifera Nn5g30492 chr5 - View
Olea europaea Oeu013276.1 chr18 - View
Punica granatum PGR004G2163 NC_045131.1 - View
Prunus persica Prupe.6G225100 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Pp06 + View
Pisum sativum Psat2g169880 Tetratricopeptide repeat chr2LG1 - View
Papaver somniferum PSO675G4881 NC_039358.1 - View
Papaver somniferum PSO541G4192 NC_039363.1 - View
Populus trichocarpa Potri.007G052200 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Chr07 + View
Phaseolus vulgaris Phvul.003G238000 PF13371//PF13414 - Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) Chr03 + View
Phaseolus vulgaris Phvul.002G013866 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Chr02 + View
Rosa chinensis RcHm_v2.0_Chr2g0107271 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0096300 chr08 + View
Salix brachista Sabra07G0045800 GWHAAZH00000007 + View
Sechium edule Sed0025120 LG14 - View
Solanum lycopersicum Solyc02g092780.3 Suppressor of RPS4-RLD 1 (AHRD V3.3 *** A0A2G3D548_CAPCH) SL4.0ch02 + View
Schrenkiella parvula Sp7g35120 PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED ch7-6 - View
Solanum pennellii Sopen02g037320 Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms.Involved in mediating effector-triggered immunity. | SUPPRESSOR OF RPS4-RLD 1 (SRFR1) | FUNCTIONS IN: protein complex scaffold | INVOLVED IN: defense response to bacterium, incompatible interaction, defense response to bacterium, negative regulation of transcription, negative regulation of defense response | LOCATED IN: nucleus, perinuclear region of cytoplasm, cytoplasm | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 , Tetratricopeptide-like helical , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch02 + View
Selenicereus undatus Hund16378 Scaffold_33677 - View
Trochodendron aralioides TAR625G0217 group4 - View
Trochodendron aralioides TAR381G1622 group11 - View
Theobroma cacao Thecc.01G067600 Tetratricopeptide repeat-like superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807611 suppressor of RPS4-RLD 1 NW_010963495.1 - View
Tripterygium wilfordii TWI09G0336 NC_052245.1 - View
Vaccinium macrocarpon vmacro17983 Similar to SRFR1: Suppressor of RPS4-RLD 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G2147 CM024069.1 + View
Vitis vinifera GSVIVG01000163001 chr7 + View