Gene: Sopen02g037320

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g037320
  • Transcript Identifier Sopen02g037320.2
  • Gene Type Coding gene
  • Location Spenn-ch02 : 58156002-58172423 : positive

Gene Family Information

  • ID HOM05D004966
  • #Genes/#Species 150/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g037320.2

Descriptions

  • Description Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms.Involved in mediating effector-triggered immunity. | SUPPRESSOR OF RPS4-RLD 1 (SRFR1) | FUNCTIONS IN: protein complex scaffold | INVOLVED IN: defense response to bacterium, incompatible interaction, defense response to bacterium, negative regulation of transcription, negative regulation of defense response | LOCATED IN: nucleus, perinuclear region of cytoplasm, cytoplasm | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 , Tetratricopeptide-like helical , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IEA
InterPronegative regulation of transcription, DNA-templated
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G37460
GO:0031348
ISO
PLAZA Integrative Orthologynegative regulation of defense response AT4G37460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0060090
ISO
PLAZA Integrative Orthologymolecular adaptor activity AT4G37460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G37460
GO:0048471
ISO
PLAZA Integrative Orthologyperinuclear region of cytoplasm AT4G37460
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G37460
GO:0043231
ISO
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT4G37460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019734 Tetratricopeptide repeat
IPR001440 Tetratricopeptide repeat 1
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR044650 Tetratricopeptide repeat protein SRFR1-like
Mapman id Description
35.1 not assigned.annotated