Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.2040 chr7 + View
Actinidia chinensis Actinidia18206 Lachesis_group13 - View
Avicennia marina MSTRG.25928 ScioBoG_4119_HRSCAF_4138 - View
Amaranthus hybridus Ah.11g044470 RNA polymerase sigma factor sigC (Sigma factor C) (Sigma-C) (RNA polymerase sigma factor sig3) (Atsig3) (Sigma factor 3) AmaHy_arrow1_Scaffold_11 - View
Aquilegia oxysepala Aqoxy7G01354 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HRGL80 PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C0G4A3 K03093 - RNA polymerase sigma factor (SIGMA70) arahy.Tifrunner.gnm1.Arahy.17 + View
Beta vulgaris EL10Ac2g03956 PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC Chr2_EL10_PGA_scaffold6 + View
Coffea canephora Cc08_g10060 Putative uncharacterized protein chr8 - View
Citrus clementina Ciclev10007968m.g scaffold_1 - View
Citrullus lanatus ClCG08G012020 RNA polymerase sigma-B factor CG_Chr08 + View
Cucumis melo MELO3C011121.2 RNA polymerase sigma factor sigC chr03 - View
Corchorus olitorius COL.COLO4_21013 RNA polymerase sigma-70 AWUE01017546.1 - View
Chenopodium quinoa AUR62009211 SIGC: RNA polymerase sigma factor sigC C_Quinoa_Scaffold_3674 + View
Cucumis sativus L. CsaV3_2G030610 RNA polymerase sigma factor sigC chr2 + View
Daucus carota DCAR_004457 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv23409 GWHABJS00000017 + View
Erythranthe guttata Migut.A00167 scaffold_1 + View
Fragaria x ananassa FAN20G3178 PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC Fvb2-3 - View
Fragaria x ananassa FAN15G3580 PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC Fvb2-4 + View
Fragaria x ananassa FAN27G1757 PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC Fvb2-1 + View
Fragaria vesca FvH4_2g35110 PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC Fvb2 + View
Gossypium hirsutum Gohir.A06G090600 PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC A06 + View
Gossypium hirsutum Gohir.D06G089600 PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC D06 + View
Gossypium raimondii Gorai.010G103500 Chr10 + View
Lupinus albus Lalb_Chr11g0064621 PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC Lalb_Chr11 - View
Lactuca sativa Lsat_1_v5_gn_6_7620 Lsat_1_v8_lg_6 - View
Magnolia biondii MBI04_g37461_MAGBIO AED:0.09 Chr04 + View
Malus domestica MD15G1089100 RNApolymerase sigma-subunit C Chr15 + View
Malus domestica MD08G1108600 RNApolymerase sigma-subunit C Chr08 + View
Medicago truncatula Medtr1g007370 RNA polymerase sigma factor chr1 - View
Nelumbo nucifera Nn8g38994 chr8 + View
Nicotiana tabacum Nitab4.5_0000318g0030 RNA polymerase sigma-70, RNA polymerase sigma factor, region 3/4, Winged helix-turn-helix DNA-binding domain, RNA polymerase sigma factor, region 2, RNA polymerase sigma-70 like domain, RNA polymerase sigma-70 region 3, RNA polymerase sigma-70 region 2, RNA polymerase sigma-70 region 4 Nitab4.5_0000318 + View
Petunia axillaris Peaxi162Scf00840g00420 RNA polymerase sigma factor SigA Peaxi162Scf00840 + View
Punica granatum PGR031G2003 NC_045127.1 - View
Populus trichocarpa Potri.006G234400 PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC Chr06 + View
Quercus lobata QL12p040820 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0306861 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim07G0144800 chr07 + View
Striga asiatica SGA_v2.0_scaffold88G27203 scaffold88 - View
Salix brachista Sabra06G0182800 GWHAAZH00000006 + View
Sechium edule Sed0010712 LG01 + View
Sechium edule Sed0019489 LG03 + View
Solanum lycopersicum Solyc08g065970.3 RNA polymerase sigma factor (AHRD V3.3 *** E4MW42_EUTHA) SL4.0ch08 + View
Solanum pennellii Sopen08g019640 Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids. | RNApolymerase sigma-subunit C (SIGC) | CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 , Winged helix-turn-helix transcription repressor DNA-binding , RNA polymerase sigma-70 region 3 , RNA polymerase sigma-70 , RNA polymerase sigma factor, region 3/4 , RNA polymerase sigma factor, SigB/SigC/SigD, plastid , RNA polymerase sigma-70 region 2 , RNA polymerase sigma-70 region 4 , RNA polymerase sigma-70 factor | BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400025465 RNA polymerase sigma factor rpoD ST4.03ch08 + View
Trochodendron aralioides TAR636G2083 group1 - View
Theobroma cacao Thecc.09G049500 Chromosome_9 - View
Tripterygium wilfordii TWI63G1583 NC_052240.1 + View
Vaccinium macrocarpon vmacro05270 Similar to SIGC: RNA polymerase sigma factor sigC (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01035330001 chr4 - View