Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr7.2040 | chr7 | + | View | |
Actinidia chinensis | Actinidia18206 | Lachesis_group13 | - | View | |
Avicennia marina | MSTRG.25928 | ScioBoG_4119_HRSCAF_4138 | - | View | |
Amaranthus hybridus | Ah.11g044470 | RNA polymerase sigma factor sigC (Sigma factor C) (Sigma-C) (RNA polymerase sigma factor sig3) (Atsig3) (Sigma factor 3) | AmaHy_arrow1_Scaffold_11 | - | View |
Aquilegia oxysepala | Aqoxy7G01354 | CHR07 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.HRGL80 | PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC | arahy.Tifrunner.gnm1.Arahy.08 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.C0G4A3 | K03093 - RNA polymerase sigma factor (SIGMA70) | arahy.Tifrunner.gnm1.Arahy.17 | + | View |
Beta vulgaris | EL10Ac2g03956 | PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC | Chr2_EL10_PGA_scaffold6 | + | View |
Coffea canephora | Cc08_g10060 | Putative uncharacterized protein | chr8 | - | View |
Citrus clementina | Ciclev10007968m.g | scaffold_1 | - | View | |
Citrullus lanatus | ClCG08G012020 | RNA polymerase sigma-B factor | CG_Chr08 | + | View |
Cucumis melo | MELO3C011121.2 | RNA polymerase sigma factor sigC | chr03 | - | View |
Corchorus olitorius | COL.COLO4_21013 | RNA polymerase sigma-70 | AWUE01017546.1 | - | View |
Chenopodium quinoa | AUR62009211 | SIGC: RNA polymerase sigma factor sigC | C_Quinoa_Scaffold_3674 | + | View |
Cucumis sativus L. | CsaV3_2G030610 | RNA polymerase sigma factor sigC | chr2 | + | View |
Daucus carota | DCAR_004457 | hypothetical protein | DCARv2_Chr1 | + | View |
Davidia involucrata | Dinv23409 | GWHABJS00000017 | + | View | |
Erythranthe guttata | Migut.A00167 | scaffold_1 | + | View | |
Fragaria x ananassa | FAN20G3178 | PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC | Fvb2-3 | - | View |
Fragaria x ananassa | FAN15G3580 | PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC | Fvb2-4 | + | View |
Fragaria x ananassa | FAN27G1757 | PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC | Fvb2-1 | + | View |
Fragaria vesca | FvH4_2g35110 | PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC | Fvb2 | + | View |
Gossypium hirsutum | Gohir.A06G090600 | PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC | A06 | + | View |
Gossypium hirsutum | Gohir.D06G089600 | PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC | D06 | + | View |
Gossypium raimondii | Gorai.010G103500 | Chr10 | + | View | |
Lupinus albus | Lalb_Chr11g0064621 | PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR SIGC | Lalb_Chr11 | - | View |
Lactuca sativa | Lsat_1_v5_gn_6_7620 | Lsat_1_v8_lg_6 | - | View | |
Magnolia biondii | MBI04_g37461_MAGBIO | AED:0.09 | Chr04 | + | View |
Malus domestica | MD15G1089100 | RNApolymerase sigma-subunit C | Chr15 | + | View |
Malus domestica | MD08G1108600 | RNApolymerase sigma-subunit C | Chr08 | + | View |
Medicago truncatula | Medtr1g007370 | RNA polymerase sigma factor | chr1 | - | View |
Nelumbo nucifera | Nn8g38994 | chr8 | + | View | |
Nicotiana tabacum | Nitab4.5_0000318g0030 | RNA polymerase sigma-70, RNA polymerase sigma factor, region 3/4, Winged helix-turn-helix DNA-binding domain, RNA polymerase sigma factor, region 2, RNA polymerase sigma-70 like domain, RNA polymerase sigma-70 region 3, RNA polymerase sigma-70 region 2, RNA polymerase sigma-70 region 4 | Nitab4.5_0000318 | + | View |
Petunia axillaris | Peaxi162Scf00840g00420 | RNA polymerase sigma factor SigA | Peaxi162Scf00840 | + | View |
Punica granatum | PGR031G2003 | NC_045127.1 | - | View | |
Populus trichocarpa | Potri.006G234400 | PTHR30603//PTHR30603:SF13 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGC | Chr06 | + | View |
Quercus lobata | QL12p040820 | 12 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr6g0306861 | RcHm_v2.0_Chr6 | - | View | |
Rhododendron simsii | Rhsim07G0144800 | chr07 | + | View | |
Striga asiatica | SGA_v2.0_scaffold88G27203 | scaffold88 | - | View | |
Salix brachista | Sabra06G0182800 | GWHAAZH00000006 | + | View | |
Sechium edule | Sed0010712 | LG01 | + | View | |
Sechium edule | Sed0019489 | LG03 | + | View | |
Solanum lycopersicum | Solyc08g065970.3 | RNA polymerase sigma factor (AHRD V3.3 *** E4MW42_EUTHA) | SL4.0ch08 | + | View |
Solanum pennellii | Sopen08g019640 | Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids. | RNApolymerase sigma-subunit C (SIGC) | CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 , Winged helix-turn-helix transcription repressor DNA-binding , RNA polymerase sigma-70 region 3 , RNA polymerase sigma-70 , RNA polymerase sigma factor, region 3/4 , RNA polymerase sigma factor, SigB/SigC/SigD, plastid , RNA polymerase sigma-70 region 2 , RNA polymerase sigma-70 region 4 , RNA polymerase sigma-70 factor | BEST Arabidopsis thaliana protein match is: RNApolymerase sigma subunit 2 | Spenn-ch08 | + | View |
Solanum tuberosum | PGSC0003DMG400025465 | RNA polymerase sigma factor rpoD | ST4.03ch08 | + | View |
Trochodendron aralioides | TAR636G2083 | group1 | - | View | |
Theobroma cacao | Thecc.09G049500 | Chromosome_9 | - | View | |
Tripterygium wilfordii | TWI63G1583 | NC_052240.1 | + | View | |
Vaccinium macrocarpon | vmacro05270 | Similar to SIGC: RNA polymerase sigma factor sigC (Arabidopsis thaliana OX%3D3702) | chr12_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vitis vinifera | GSVIVG01035330001 | chr4 | - | View |