Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G15420 LG-11 - View
Acer truncatum Atru.chr6.2694 chr6 - View
Actinidia chinensis Actinidia37718 Lachesis_group21 + View
Arabidopsis lyrata AL6G24620 scaffold_6 + View
Avicennia marina MSTRG.24120 ScioBoG_3895_HRSCAF_3912 - View
Aquilegia oxysepala Aqoxy5G03142 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MS6J7I PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZU3NW2 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT5G13960 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog%2C a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants%2C there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG%2C CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres. SU(VAR)3-9 homolog 4 (SUVH4)%3B FUNCTIONS IN: double-stranded methylated DNA binding%2C methyl-CpNpG binding%2C methyl-CpG binding%2C histone methyltransferase activity (H3-K9 specific)%2C methyl-CpNpN binding%3B INVOLVED IN: maintenance of DNA methylation%2C histone methylation%2C peptidyl-lysine methylation%2C histone H3-K9 methylation%3B LOCATED IN: nucleus%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214)%2C SRA-YDG (InterPro:IPR003105)%2C Pre-SET domain (InterPro:IPR007728)%2C Post-SET domain (InterPro:IPR003616)%3B BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB01g05324 ChrB01 - View
Brassica napus A03p06320 A03 + View
Brassica oleracea BolC3t13231H C3 + View
Brassica rapa BraA03t09962Z A03 + View
Beta vulgaris EL10Ac6g13405 PTHR22884:SF352 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G473.159 PGAv.1.6.scaffold473 - View
Cannabis sativa CANSAT64G0556 NC_044379.1 + View
Cicer arietinum L. Ca_08142_v3 Ca_LG3_v3 - View
Corylus avellana Haze_14950 Similar to SUVH4: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_12498 Similar to SUVH4: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc07_g01290 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 chr7 - View
Ceratophyllum demersum CDE05G2214 3 + View
Carpinus fangiana Cfa007163 Cfa03 + View
Cardamine hirsuta CARHR199430 Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 Chr6 - View
Carya illinoinensis CiPaw.04G001400 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Chr04 + View
Carya illinoinensis CiPaw.05G101600 Chr05 + View
Citrullus lanatus ClCG05G012610 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 CG_Chr05 + View
Corchorus olitorius COL.COLO4_13375 hypothetical protein AWUE01015160.1 - View
Carica papaya Cpa.g.sc70.65 supercontig_70 + View
Chenopodium quinoa AUR62037824 SUVH4: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 C_Quinoa_Scaffold_1699 + View
Cucumis sativus L. CsaV3_3G027790 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 chr3 - View
Daucus carota DCAR_014470 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv25617 GWHABJS00000012 - View
Durio zibethinus Duzib147G1174 NW_019168470.1 - View
Erigeron canadensis ECA246G2162 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.G01930 Chr07 + View
Eutrema salsugineum Thhalv10012985m.g PTHR22884:SF352 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 scaffold_2 + View
Fragaria x ananassa FAN05G0965 K11420 - euchromatic histone-lysine N-methyltransferase (EHMT) Fvb6-3 + View
Fragaria x ananassa FAN14G3196 K11420 - euchromatic histone-lysine N-methyltransferase (EHMT) Fvb6-1 + View
Fragaria x ananassa FAN09G1101 K11420 - euchromatic histone-lysine N-methyltransferase (EHMT) Fvb6-2 - View
Fragaria vesca FvH4_6g54300 PTHR22884:SF352 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Fvb6 - View
Gossypium hirsutum Gohir.D02G175300 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 D02 - View
Gossypium hirsutum Gohir.D04G073300 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 D04 + View
Glycine max Glyma.16G047800 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Gm16 + View
Glycine max Glyma.19G103550 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Gm19 - View
Gossypium raimondii Gorai.012G082600 Chr12 + View
Gossypium raimondii Gorai.005G196900 Chr05 - View
Hydrangea macrophylla Hma1.2p1_0421F.1_g149950 Hma1.2p1_0421F.1 + View
Lupinus albus Lalb_Chr22g0359981 PTHR22884:SF352 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Lalb_Chr22 - View
Lotus japonicus Lj1g0012834 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 chr1 + View
Lonicera japonica Lj7C617G4 GWHAAZE00000007 - View
Malus domestica MD17G1006800 SU(VAR)3-9 homolog 4 Chr17 + View
Malus domestica MD09G1002600 SU(VAR)3-9 homolog 4 Chr09 + View
Manihot esculenta Manes.04G093100 Chromosome04 - View
Medicago truncatula Medtr7g084090 histone-lysine N-methyltransferase, suvh protein chr7 - View
Nelumbo nucifera Nn4g22135 chr4 + View
Nicotiana tabacum Nitab4.5_0002172g0190 PUA-like domain, SRA-YDG Nitab4.5_0002172 - View
Nicotiana tabacum Nitab4.5_0000519g0330 SRA-YDG, PUA-like domain, Pre-SET zinc-binding sub-group, SET domain, Histone H3-K9 methyltransferase, plant, Pre-SET domain, Post-SET domain Nitab4.5_0000519 - View
Petunia axillaris Peaxi162Scf00420g00852 Histone-lysine N-methyltransferase Su(var)3-9 Peaxi162Scf00420 - View
Punica granatum PGR042G3237 NC_045130.1 - View
Prunus persica Prupe.3G313600 PTHR22884:SF352 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Pp03 - View
Pisum sativum Psat3g093120 SAD/SRA domain chr3LG5 - View
Papaver somniferum PSO017G4606 NC_039362.1 + View
Populus trichocarpa Potri.014G143900 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Chr14 - View
Populus trichocarpa Potri.002G237950 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 Chr02 + View
Quercus lobata QL03p049447 3 + View
Quercus lobata QL02p069506 CM012294 + View
Rhododendron simsii Rhsim10G0001200 chr10 + View
Rhododendron simsii Rhsim08G0039100 chr08 + View
Striga asiatica SGA_v2.0_scaffold34G13689 scaffold34 + View
Salix brachista Sabra02G0181400 GWHAAZH00000002 + View
Salix brachista Sabra03G0118400 GWHAAZH00000003 + View
Simmondsia chinensis Sc03g0005230 GWHAASQ00000003 - View
Sechium edule Sed0027464 LG10 - View
Sechium edule Sed0001012 LG06 + View
Solanum lycopersicum Solyc02g094520.3 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like (AHRD V3.3 *** A0A1S3YJW9_TOBAC) SL4.0ch02 - View
Schrenkiella parvula Sp6g30040 PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 ch6-6 - View
Solanum pennellii Sopen02g039200 Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres. | SU(VAR)3-9 homolog 4 (SUVH4) | FUNCTIONS IN: double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpG binding, histone methyltransferase activity (H3-K9 specific), methyl-CpNpN binding | INVOLVED IN: maintenance of DNA methylation, histone methylation, peptidyl-lysine methylation, histone H3-K9 methylation | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: SET domain , SRA-YDG , Pre-SET domain , Post-SET domain | BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 Spenn-ch02 - View
Selenicereus undatus Hund06131 Scaffold_19641 - View
Theobroma cacao Thecc.04G047900 SET domain protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104822423 histone-lysine N-methyltransferase%2C H3 lysine-9 specific SUVH4 isoform X1 NW_010966665.1 - View
Vaccinium macrocarpon vmacro18380 Similar to SUVH4: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01032986001 chr14 + View
Vitis vinifera GSVIVG01001083001 chr1 - View
Zea mays Zm00001eb142610 Zm00001e018769 Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4 3 - View