Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G7610 LG-10 + View
Aethionema arabicum Aa31LG5G21300 LG-5 + View
Acer truncatum Atru.chr8.1466 chr8 + View
Actinidia chinensis Actinidia05410 Lachesis_group5 - View
Arabidopsis lyrata AL4G32270 scaffold_4 + View
Arabidopsis lyrata AL5G33370 scaffold_5 + View
Avicennia marina MSTRG.19297 ScioBoG_25048_HRSCAF_25167 - View
Amaranthus hybridus Ah.08g210460 AmaHy_arrow1_Scaffold_8 + View
Aquilegia oxysepala Aqoxy2G01084 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I8M745 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L94IR5 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT3G52590 ubiquitin extension protein 1 Ubiquitin extension protein ubiquitin extension protein 1 (UBQ1)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: response to water deprivation%2C protein ubiquitination%2C embryo development ending in seed dormancy%3B LOCATED IN: ribosome%2C intracellular%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L40e (InterPro:IPR001975)%2C Ubiquitin subgroup (InterPro:IPR019956)%2C Ubiquitin conserved site (InterPro:IPR019954)%2C Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin supergroup%3BRibosomal protein L40e (TAIR:AT2G36170.1)%3B Has 12437 Blast hits to 7147 proteins in 724 species: Archae - 0%3B Bacteria - 19%3B Metazoa - 5493%3B Fungi - 1424%3B Plants - 3085%3B Viruses - 174%3B Other Eukaryotes - 2242 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT2G36170 60S ribosomal protein L40-1 Ubiquitin supergroup%3BRibosomal protein L40e%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic large ribosomal subunit%2C nucleolus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L40e (InterPro:IPR001975)%2C Ubiquitin subgroup (InterPro:IPR019956)%2C Ubiquitin conserved site (InterPro:IPR019954)%2C Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: ubiquitin extension protein 1 (TAIR:AT3G52590.1)%3B Has 12454 Blast hits to 7164 proteins in 726 species: Archae - 0%3B Bacteria - 25%3B Metazoa - 5499%3B Fungi - 1428%3B Plants - 3086%3B Viruses - 174%3B Other Eukaryotes - 2242 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0820G129 AmTr_v1.0_scaffold00040 - View
Brassica carinata BcaC07g39629 ChrC07 + View
Brassica carinata BcaB02g09379 ChrB02 - View
Brassica carinata BcaC02g09240 ChrC02 - View
Brassica carinata BcaC02g07626 ChrC02 - View
Brassica napus C04p40390 C04 - View
Brassica napus C03p23390 C03 + View
Brassica napus C04p12000 C04 - View
Brassica napus A09p45690 A09 + View
Brassica napus C08p27890 C08 + View
Brassica napus A05p09650 A05 - View
Brassica oleracea BolC4t22844H C4 - View
Brassica oleracea BolC4t25619H C4 - View
Brassica oleracea BolC8t50404H C8 + View
Brassica oleracea BolC4t27999H C4 + View
Brassica rapa BraA03t11247Z A03 + View
Brassica rapa BraA05t19919Z A05 - View
Beta vulgaris EL10Ac7g16889 K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) Chr7_EL10_PGA_scaffold5 + View
Citrus clementina Ciclev10013083m.g scaffold_6 + View
Cardamine hirsuta CARHR130400 Ubiquitin, putative Chr4 + View
Cardamine hirsuta CARHR162410 Ubiquitin, putative Chr5 + View
Carya illinoinensis CiPaw.10G011700 K02927//K02977//K08770//K12158 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) // ubiquitin-like protein Nedd8 (NEDD8) Chr10 - View
Carya illinoinensis CiPaw.09G016200 KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion Chr09 - View
Carica papaya Cpa.g.sc104.105 supercontig_104 + View
Chenopodium quinoa AUR62037008 UBICEP52-7: Ubiquitin-60S ribosomal protein L40 C_Quinoa_Scaffold_1847 + View
Capsella rubella Carub.0005s1901 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) scaffold_5 + View
Capsella rubella Carub.0004s1793 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) scaffold_4 + View
Davidia involucrata Dinv31710 GWHABJS00000015 - View
Durio zibethinus Duzib093G1685 NW_019167937.1 + View
Durio zibethinus Duzib106G0918 NW_019168492.1 + View
Durio zibethinus Duzib128G1322 NW_019168481.1 + View
Eucalyptus grandis Eucgr.K02560 Chr11 + View
Eutrema salsugineum Thhalv10017417m.g K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) scaffold_10 + View
Fragaria x ananassa FAN14G4079 K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) Fvb6-1 + View
Fragaria vesca FvH4_6g19302 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Fvb6 - View
Gossypium hirsutum Gohir.D09G133900 K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) D09 + View
Gossypium hirsutum Gohir.D11G338300 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) D11 + View
Gossypium hirsutum Gohir.A09G140600 K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) A09 - View
Glycine max Glyma.03G197600 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Gm03 - View
Glycine max Glyma.19G195500 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Gm19 - View
Gossypium raimondii Gorai.007G368200 Chr07 + View
Gossypium raimondii Gorai.006G153300 Chr06 + View
Lupinus albus Lalb_Chr20g0111621 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Lalb_Chr20 + View
Lupinus albus Lalb_Chr01g0018041 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Lalb_Chr01 + View
Lotus japonicus Lj5g0018495 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) chr5 + View
Lotus japonicus Lj5g0014204 K08770 - ubiquitin C (UBC) chr5 - View
Lotus japonicus Lj1g0002368 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) chr1 + View
Malus domestica MD12G1028600 ubiquitin extension protein 1 Chr12 - View
Malus domestica MD14G1028800 ubiquitin extension protein 1 Chr14 - View
Manihot esculenta Manes.08G027400 Chromosome08 - View
Manihot esculenta Manes.09G053400 Chromosome09 + View
Medicago truncatula Medtr7g105080 ubiquitin-60S ribosomal L40 fusion protein chr7 - View
Medicago truncatula Medtr1g059690 ubiquitin-60S ribosomal L40 fusion protein chr1 + View
Nelumbo nucifera Nn6g34831 chr6 + View
Nelumbo nucifera Nn2g14213 chr2 - View
Punica granatum PGR142G3787 NC_045128.1 - View
Prunus persica Prupe.7G102800 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Pp07 + View
Populus trichocarpa Potri.016G077000 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Chr16 + View
Phaseolus vulgaris Phvul.001G191700 K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Chr01 - View
Quercus lobata QL07p038382 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0474431 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim03G0070800 chr03 + View
Schrenkiella parvula Sp4g18400 K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) ch4-6 + View
Schrenkiella parvula Sp3g09740 K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) ch3-1 - View
Theobroma cacao Thecc.05G093500 Ubiquitin extension protein 1 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104816592 ubiquitin-60S ribosomal protein L40 NW_010965775.1 - View
Tarenaya hassleriana THA.LOC104823496 ubiquitin-60S ribosomal protein L40 NW_010966881.1 - View
Trifolium pratense TPR.G23352 Tp57577_TGAC_v2_LG6 + View
Trifolium pratense TPR.G14793 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI74G0685 NC_052234.1 - View
Tripterygium wilfordii TWI77G0913 NC_052236.1 + View
Vigna mungo VMungo1383G0865 CM024070.1 - View
Vitis vinifera GSVIVG01033876001 chr8 + View