Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0027296 Dof zinc finger protein [Morus notabilis] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G11210 LG-4 + View
Aethionema arabicum Aa31LG7G8330 LG-7 + View
Acer truncatum Atru.chr11.1769 chr11 - View
Actinidia chinensis Actinidia33203 Lachesis_group12 + View
Arabidopsis lyrata AL2G28710 scaffold_2 - View
Arabidopsis lyrata AL1G38900 scaffold_1 + View
Arabidopsis lyrata AL8G39310 scaffold_8 - View
Avicennia marina MSTRG.4433 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.708 ScioBoG_102831_HRSCAF_103044 + View
Amaranthus hybridus Ah.02g113610 AmaHy_arrow1_Scaffold_2 + View
Amaranthus hybridus Ah.02g129620 AmaHy_arrow1_Scaffold_2 - View
Amaranthus hybridus Ah.11g048340 Cyclic dof factor 3 (Dof zinc finger protein DOF3.3) (AtDOF3.3) (H-protein promoter-binding factor 2a) AmaHy_arrow1_Scaffold_11 - View
Aquilegia oxysepala Aqoxy3G03423 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B68HGA PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.02S8F1 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MQC2P6 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT1G69570 Dof-type zinc finger DNA-binding family protein Dof-type zinc finger DNA-binding family protein%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G26790.1)%3B Has 1305 Blast hits to 1151 proteins in 75 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 16%3B Fungi - 10%3B Plants - 1107%3B Viruses - 0%3B Other Eukaryotes - 166 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G26790 Dof-type zinc finger DNA-binding family protein Dof-type zinc finger DNA-binding family protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: stem%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT1G69570.1)%3B Has 1165 Blast hits to 1142 proteins in 80 species: Archae - 0%3B Bacteria - 20%3B Metazoa - 7%3B Fungi - 8%3B Plants - 1093%3B Viruses - 0%3B Other Eukaryotes - 37 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT5G62430 cycling DOF factor 1 Dof-type zinc finger domain-containing protein%2C similar to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Represses expression of Constans (CO)%2C a circadian regulator of flowering time. Interacts with LKP2 and FKF1. Expression oscillates under constant light conditions. Mainly expressed in the vasculature of cotyledons%2C leaves and hypocotyls%2C but also in stomata. Localized to the nucleus and acts as a repressor of CONSTANS through binding to the Dof binding sites in the CO promoter. Protein gets degraded by FKF1 in the afternoon. cycling DOF factor 1 (CDF1)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C Dof-type (InterPro:IPR003851)%3B BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 (TAIR:AT3G47500.1)%3B Has 1130 Blast hits to 1085 proteins in 56 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1125%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0564G304 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaC08g46398 ChrC08 - View
Brassica carinata BcaC07g39276 ChrC07 + View
Brassica carinata BcaB03g12005 ChrB03 - View
Brassica carinata BcaB01g00915 ChrB01 + View
Brassica carinata BcaB03g14726 ChrB03 - View
Brassica carinata BcaC05g26384 ChrC05 + View
Brassica carinata BcaC01g02468 ChrC01 - View
Brassica napus C08p22860 C08 + View
Brassica napus A07p35930 A07 - View
Brassica napus A09p40220 A09 - View
Brassica napus C06p43300 C06 - View
Brassica napus A08p27490 A08 - View
Brassica napus A07p31550 A07 + View
Brassica napus C05p24140 C05 + View
Brassica oleracea BolC5t31149H C5 + View
Brassica oleracea BolC8t49922H C8 + View
Brassica oleracea BolC6t38792H C6 + View
Brassica oleracea BolC6t39405H C6 - View
Brassica rapa BraA07t31176Z A07 - View
Brassica rapa BraA09t39520Z A09 - View
Brassica rapa BraA08t34689Z A08 - View
Beta vulgaris EL10Ac6g13222 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Chr6_EL10_PGA_scaffold0 + View
Cicer arietinum L. Ca_04817_v3 Ca_LG2_v3 + View
Cicer arietinum L. Ca_18828_v3 Ca_LG6_v3 - View
Corylus avellana Haze_11999 Similar to CDF2: Cyclic dof factor 2 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_07317 Similar to CDF3: Cyclic dof factor 3 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc11_g12870 Putative Dof zinc finger protein DOF5.2 chr11 - View
Citrus clementina Ciclev10031433m.g scaffold_4 + View
Citrus clementina Ciclev10011556m.g scaffold_6 + View
Ceratophyllum demersum CDE08G0718 6 + View
Carpinus fangiana Cfa008968 Cfa03 - View
Cardamine hirsuta CARHR276230 Dof zinc finger protein Chr8 - View
Cardamine hirsuta CARHR156140 Dof zinc finger protein Chr5 - View
Cardamine hirsuta CARHR025150 Dof zinc finger protein Chr1 + View
Cardamine hirsuta CARHR062520 Dof zinc finger protein Chr2 - View
Carya illinoinensis CiPaw.06G086300 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr06 + View
Carya illinoinensis CiPaw.11G045500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr11 + View
Carya illinoinensis CiPaw.05G133500 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Chr05 - View
Citrullus lanatus ClCG05G024190 Dof zinc finger protein CG_Chr05 - View
Cucumis melo MELO3C012104.2 cyclic dof factor 1 chr10 - View
Corchorus olitorius COL.COLO4_22952 Zinc finger%2C Dof-type AWUE01018132.1 - View
Carica papaya Cpa.g.sc128.41 supercontig_128 + View
Chenopodium quinoa AUR62032799 CDF2: Cyclic dof factor 2 C_Quinoa_Scaffold_3751 + View
Chenopodium quinoa AUR62005809 CDF2: Cyclic dof factor 2 C_Quinoa_Scaffold_1214 + View
Capsella rubella Carub.0002s1624 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED scaffold_2 - View
Capsella rubella Carub.0001s2422 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_1 + View
Capsella rubella Carub.0005s1359 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_5G032810 cyclic dof factor 1 chr5 + View
Cucumis sativus L. CsaV3_1G002390 cyclic dof factor 3 chr1 + View
Daucus carota DCAR_007160 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_027420 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_031013 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv34143 GWHABJS00000008 - View
Davidia involucrata Dinv10640 GWHABJS00000006 - View
Davidia involucrata Dinv16658 GWHABJS00000018 + View
Davidia involucrata Dinv38720 GWHABJS00000019 - View
Durio zibethinus Duzib205G1231 NW_019168381.1 + View
Durio zibethinus Duzib264G0349 NW_019167960.1 + View
Durio zibethinus Duzib251G0890 NW_019167971.1 - View
Durio zibethinus Duzib068G0179 NW_019167838.1 + View
Durio zibethinus Duzib147G1585 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019168470.1 - View
Erigeron canadensis ECA233G1744 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.G02493 Chr07 - View
Eucalyptus grandis Eucgr.B00515 Chr02 + View
Erythranthe guttata Migut.L01278 scaffold_12 - View
Erythranthe guttata Migut.D01811 scaffold_4 - View
Eutrema salsugineum Thhalv10018679m.g PTHR31089:SF1 - CYCLIC DOF FACTOR 4-RELATED scaffold_9 + View
Eutrema salsugineum Thhalv10007936m.g PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10010412m.g PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED scaffold_16 + View
Fragaria x ananassa FAN08G0828 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb5-3 + View
Fragaria x ananassa FAN14G0745 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb6-1 + View
Fragaria x ananassa FAN07G0856 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-4 + View
Fragaria x ananassa FAN22G0153 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-1 - View
Fragaria x ananassa FAN17G2154 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-2 + View
Fragaria x ananassa FAN13G2004 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb5-2 - View
Fragaria x ananassa FAN12G2237 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4-3 + View
Fragaria vesca FvH4_5g14830 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Fvb5 - View
Fragaria vesca FvH4_4g31210 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED Fvb4 - View
Gossypium hirsutum Gohir.D11G073900 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED D11 + View
Gossypium hirsutum Gohir.D09G013450 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED D09 - View
Gossypium hirsutum Gohir.D04G191500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED D04 - View
Gossypium hirsutum Gohir.A09G014900 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED A09 - View
Gossypium hirsutum Gohir.D12G167500 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED D12 - View
Glycine max Glyma.01G049400 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm01 + View
Glycine max Glyma.05G025900 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm05 - View
Glycine max Glyma.20G035200 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm20 - View
Glycine max Glyma.17G101000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm17 + View
Glycine max Glyma.02G108600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm02 + View
Glycine max Glyma.04G168300 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Gm04 - View
Gossypium raimondii Gorai.012G186900 Chr12 - View
Gossypium raimondii Gorai.008G180400 Chr08 - View
Gossypium raimondii Gorai.006G015500 Chr06 - View
Gossypium raimondii Gorai.007G079300 Chr07 + View
Helianthus annuus HanXRQChr08g0210891 Probable dof zinc finger protein DOF1.3 HanXRQChr08 - View
Lupinus albus Lalb_Chr17g0340791 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr17 + View
Lupinus albus Lalb_Chr10g0098311 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr10 - View
Lupinus albus Lalb_Chr13g0303181 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lalb_Chr13 - View
Lotus japonicus Lj2g0003484 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr2 + View
Lotus japonicus Lj1g0017181 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED chr1 + View
Lonicera japonica Lj3A1036T38 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_5_19880 PTHR31089:SF1 - CYCLIC DOF FACTOR 4-RELATED Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_51160 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Lsat_1_v8_lg_8 - View
Magnolia biondii MBI02_g42048_MAGBIO AED:0.01 Chr02 - View
Magnolia biondii MBI19_g09310_MAGBIO AED:0.05 Chr19 + View
Magnolia biondii MBI05_g10777_MAGBIO AED:0.00 Chr05 - View
Malus domestica MD13G1070600 cycling DOF factor 2 Chr13 - View
Malus domestica MD06G1194500 cycling DOF factor 3 Chr06 + View
Malus domestica MD16G1071400 cycling DOF factor 2 Chr16 - View
Malus domestica MD14G1201600 cycling DOF factor 3 Chr14 + View
Manihot esculenta Manes.01G035000 Chromosome01 - View
Manihot esculenta Manes.01G092100 Chromosome01 + View
Manihot esculenta Manes.05G103100 Chromosome05 + View
Manihot esculenta Manes.14G079000 Chromosome14 + View
Medicago truncatula Medtr5g041380 DOF domain, zinc finger protein chr5 + View
Medicago truncatula Medtr7g010950 DOF-type zinc finger DNA-binding family protein chr7 + View
Medicago truncatula Medtr4g082060 DOF-type zinc finger DNA-binding family protein chr4 + View
Nelumbo nucifera Nn3g17266 chr3 + View
Nelumbo nucifera Nn4g23198 chr4 + View
Nicotiana tabacum Nitab4.5_0000014g0070 Zinc finger, Dof-type Nitab4.5_0000014 + View
Nicotiana tabacum Nitab4.5_0000040g0250 Zinc finger, Dof-type Nitab4.5_0000040 - View
Olea europaea Oeu020371.1 chr18 + View
Petunia axillaris Peaxi162Scf00222g00057 Dof-type zinc finger DNA-binding family protein Peaxi162Scf00222 - View
Punica granatum PGR119G1540 NC_045132.1 - View
Punica granatum PGR083G1369 NC_045133.1 + View
Prunus persica Prupe.5G194600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Pp05 + View
Prunus persica Prupe.1G276000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Pp01 + View
Prunus persica Prupe.3G266200 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Pp03 - View
Populus trichocarpa Potri.008G087800 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr08 + View
Populus trichocarpa Potri.010G167600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr10 - View
Phaseolus vulgaris Phvul.002G170600 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr02 + View
Phaseolus vulgaris Phvul.002G084000 PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Chr02 - View
Quercus lobata QL03p068694 3 - View
Quercus lobata QL10p017159 10 + View
Quercus lobata QL02p082478 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr4g0439611 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim10G0038600 chr10 + View
Rhododendron simsii Rhsim03G0049100 chr03 - View
Rhododendron simsii Rhsim12G0064300 chr12 + View
Rhododendron simsii Rhsim08G0154300 chr08 - View
Salvia bowleyana SalBow2G2111 GWHASIU00000007 - View
Salix brachista Sabra08G0065600 GWHAAZH00000008 + View
Salix brachista Sabra04G0091000 GWHAAZH00000004 + View
Salix brachista Sabra10G0127400 GWHAAZH00000010 - View
Simmondsia chinensis Sc11g0002010 GWHAASQ00000011 + View
Sechium edule Sed0016004 LG12 + View
Sechium edule Sed0005974 LG06 - View
Sechium edule Sed0003311 LG04 + View
Solanum lycopersicum Solyc05g007880.4 cyclic dof factor 2-like (AHRD V3.3 *** A0A2I4E3P6_9ROSI) SL4.0ch05 - View
Solanum lycopersicum Solyc02g067230.3 Dof zinc finger protein3 SL4.0ch02 - View
Schrenkiella parvula Sp5g24690 PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED ch5-6 - View
Schrenkiella parvula Sp1g22010 PTHR31089//PTHR31089:SF4 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 2-RELATED ch1-1 + View
Solanum pennellii Sopen05g003730 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 2 (CDF2) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 3 Spenn-ch05 - View
Solanum pennellii Sopen06g027050 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. | cycling DOF factor 3 (CDF3) | CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type | BEST Arabidopsis thaliana protein match is: cycling DOF factor 1 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400001330 Zinc finger protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400018408 Zinc finger protein ST4.03ch05 + View
Trochodendron aralioides TAR371G0107 group13 + View
Trochodendron aralioides TAR629G3217 group0 - View
Theobroma cacao Thecc.03G090000 Cycling DOF factor 2 Chromosome_3 + View
Theobroma cacao Thecc.04G083700 Dof zinc finger protein DOF5.2 Chromosome_4 + View
Theobroma cacao Thecc.02G344400 F-box family protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104821418 cyclic dof factor 3 NW_010966459.1 - View
Tarenaya hassleriana THA.LOC104822909 cyclic dof factor 5-like NW_010966822.1 - View
Trifolium pratense TPR.G34025 Tp57577_TGAC_v2_LG2 - View
Trifolium pratense TPR.G39254 Tp57577_TGAC_v2_LG3 + View
Utricularia gibba unitig_749.g13226 unitig_749 - View
Vigna mungo VMungo1215G3254 CM024074.1 + View
Vigna mungo VMungo0251G1572 CM024069.1 + View
Vigna mungo VMungo1309G1521 CM024072.1 + View
Vigna mungo VMungo1215G0120 CM024074.1 + View
Vitis vinifera GSVIVG01011433001 chr14 + View
Vitis vinifera GSVIVG01007992001 chr17 + View
Vitis vinifera GSVIVG01019969001 chr1 + View