Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G17210 LG-4 - View
Aethionema arabicum Aa31LG1G18570 LG-1 + View
Acer truncatum Atru.chr6.1801 chr6 - View
Actinidia chinensis Actinidia08878 Lachesis_group2 + View
Actinidia chinensis Actinidia36811 Lachesis_group9 + View
Arabidopsis lyrata AL5G28040 scaffold_5 - View
Arabidopsis lyrata AL8G40530 scaffold_8 - View
Arabidopsis lyrata AL8G24720 scaffold_8 - View
Avicennia marina MSTRG.22901 ScioBoG_3703_HRSCAF_3719 + View
Avicennia marina MSTRG.11275 ScioBoG_14204_HRSCAF_14270 + View
Avicennia marina MSTRG.9330 ScioBoG_12795_HRSCAF_12848 - View
Amaranthus hybridus Ah.02g114860 Nuclear transcription factor Y subunit C-1 (AtNF-YC-1) (Transcriptional activator HAP5A) AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy3G01568 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HG1CGX PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DHT5D0 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT3G48590 nuclear factor Y, subunit C1 Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues. nuclear factor Y%2C subunit C1 (NF-YC1)%3B CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958)%2C Histone-fold (InterPro:IPR009072)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit C4 (TAIR:AT5G63470.2)%3B Has 1348 Blast hits to 1348 proteins in 229 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 449%3B Fungi - 353%3B Plants - 430%3B Viruses - 0%3B Other Eukaryotes - 116 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G50470 nuclear factor Y, subunit C7 nuclear factor Y%2C subunit C7 (NF-YC7)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%2C intracellular%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958)%2C Histone-fold (InterPro:IPR009072)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit C6 (TAIR:AT5G50480.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G63470 nuclear factor Y, subunit C4 nuclear factor Y%2C subunit C4 (NF-YC4)%3B CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958)%2C Histone-fold (InterPro:IPR009072)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit C1 (TAIR:AT3G48590.1)%3B Has 1376 Blast hits to 1376 proteins in 227 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 467%3B Fungi - 353%3B Plants - 441%3B Viruses - 0%3B Other Eukaryotes - 115 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB02g09759 ChrB02 + View
Brassica carinata BcaB01g00794 ChrB01 + View
Brassica carinata BcaC04g23331 ChrC04 - View
Brassica carinata BcaB04g19919 ChrB04 - View
Brassica napus C09p09350 C09 - View
Brassica napus A06p30100 A06 - View
Brassica napus C03p62970 C03 + View
Brassica napus A06p19060 A06 + View
Brassica napus C08p23640 C08 - View
Brassica oleracea BolC9t53847H C9 - View
Brassica oleracea BolC8t49993H C8 - View
Brassica oleracea BolC3t18551H C3 + View
Brassica rapa BraA06t24990Z A06 + View
Brassica rapa BraA06t25961Z A06 - View
Beta vulgaris EL10Ac5g11403 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Chr5_EL10_PGA_scaffold2 + View
Cicer arietinum L. Ca_16050_v3 Ca_LG5_v3 - View
Corylus avellana Haze_07147 Similar to NFYC1: Nuclear transcription factor Y subunit C-1 (Arabidopsis thaliana OX%3D3702) 4 - View
Citrus clementina Ciclev10032646m.g scaffold_4 - View
Ceratophyllum demersum CDE06G0302 4 - View
Cardamine hirsuta CARHR157380 Nuclear transcription factor Y subunit C-1 Chr5 - View
Cardamine hirsuta CARHR257790 Nuclear transcription factor Y subunit C-9 Chr8 + View
Cardamine hirsuta CARHR277320 Nuclear transcription factor Y subunit C-1 Chr8 - View
Carya illinoinensis CiPaw.12G043800 PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Chr12 - View
Citrullus lanatus ClCG06G017930 Nuclear transcription factor Y subunit C-1 CG_Chr06 - View
Cucumis melo MELO3C026204.2 nuclear transcription factor Y subunit C-1 chr02 - View
Carica papaya Cpa.g.sc13.107 supercontig_13 + View
Chenopodium quinoa AUR62029605 NFYC1: Nuclear transcription factor Y subunit C-1 C_Quinoa_Scaffold_2306 + View
Capsella rubella Carub.0008s2417 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED scaffold_8 - View
Capsella rubella Carub.0005s1478 K08066 - nuclear transcription factor Y, gamma (NFYC) scaffold_5 - View
Cucumis sativus L. CsaV3_1G000520 Nuclear transcription factor Y subunit C chr1 + View
Daucus carota DCAR_007494 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv23155 GWHABJS00000019 - View
Davidia involucrata Dinv11181 GWHABJS00000006 - View
Durio zibethinus Duzib084G0605 NW_019167827.1 - View
Durio zibethinus Duzib068G0355 NW_019167838.1 - View
Durio zibethinus Duzib205G0589 NW_019168381.1 - View
Erigeron canadensis ECA246G2484 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.B00106 Chr02 + View
Eucalyptus grandis Eucgr.K02714 Chr11 + View
Erythranthe guttata Migut.D01269 scaffold_4 - View
Erythranthe guttata Migut.I00537 scaffold_9 - View
Eutrema salsugineum Thhalv10004831m.g PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED scaffold_6 + View
Eutrema salsugineum Thhalv10010679m.g PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED scaffold_16 + View
Eutrema salsugineum Thhalv10015323m.g PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED scaffold_2 + View
Fragaria x ananassa FAN18G4126 PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Fvb5-1 - View
Fragaria x ananassa FAN08G0116 PF00808//PF04669 - Histone-like transcription factor (CBF/NF-Y) and archaeal histone (CBFD_NFYB_HMF) // Polysaccharide biosynthesis (Polysacc_synt_4) Fvb5-3 + View
Fragaria vesca FvH4_5g08391 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Fvb5 - View
Gossypium hirsutum Gohir.D07G055300 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED D07 + View
Gossypium hirsutum Gohir.D12G192400 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED D12 - View
Gossypium hirsutum Gohir.A07G050801 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED A07 + View
Gossypium hirsutum Gohir.A12G190000 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED A12 - View
Glycine max Glyma.06G169600 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Gm06 + View
Glycine max Glyma.04G196200 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Gm04 - View
Gossypium raimondii Gorai.001G058500 Chr01 + View
Gossypium raimondii Gorai.008G206700 Chr08 - View
Hydrangea macrophylla Hma1.2p1_0014F.1_g009340 Hma1.2p1_0014F.1 + View
Lotus japonicus Lj1g0008679 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED chr1 - View
Lonicera japonica Lj9E479T1 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_5_12561 PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Lsat_1_v8_lg_5 + View
Malus domestica MD06G1141200 nuclear factor Y Chr06 + View
Malus domestica MD14G1156400 nuclear factor Y Chr14 + View
Manihot esculenta Manes.14G050900 Chromosome14 + View
Manihot esculenta Manes.06G120200 Chromosome06 - View
Medicago truncatula Medtr3g099180 nuclear transcription factor Y protein chr3 + View
Nelumbo nucifera Nn4g22298 chr4 + View
Nelumbo nucifera Nn3g16442 chr3 + View
Olea europaea Oeu061149.1 chr10 - View
Punica granatum PGR044G0781 NC_045134.1 - View
Punica granatum PGR083G1421 NC_045133.1 + View
Prunus persica Prupe.5G150400 PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Pp05 + View
Pisum sativum Psat5g051800 Histone-like transcription factor (CBF/NF-Y) and archaeal histone chr5LG3 - View
Papaver somniferum PSO478G0136 NC_039361.1 - View
Populus trichocarpa Potri.012G098500 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Chr12 - View
Populus trichocarpa Potri.015G097400 PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED Chr15 - View
Phaseolus vulgaris Phvul.009G166000 Chr09 + View
Quercus lobata QL10p002791 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0190051 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim08G0190700 chr08 - View
Rhododendron simsii Rhsim12G0175400 chr12 - View
Striga asiatica SGA_v2.0_scaffold5G02863 scaffold5 + View
Salvia bowleyana SalBow1G5730 GWHASIU00000001 - View
Salix brachista Sabra12G0071900 GWHAAZH00000012 - View
Salix brachista Sabra15G0118100 GWHAAZH00000015 - View
Simmondsia chinensis Sc04g0000600 GWHAASQ00000004 + View
Sechium edule Sed0004647 LG12 - View
Sechium edule Sed0010355 LG08 + View
Solanum lycopersicum Solyc03g111450.3 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) SL4.0ch03 - View
Solanum lycopersicum Solyc03g110840.3 Nuclear transcription factor Y subunit C (AHRD V3.3 *-* A0A0D3GXF4_9ORYZ) SL4.0ch03 + View
Schrenkiella parvula Sp5g13380 PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED ch5-1 + View
Schrenkiella parvula Sp6g12670 PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED ch6-6 - View
Schrenkiella parvula Sp2g26550 K08066 - nuclear transcription factor Y, gamma (NFYC) ch2-4 - View
Solanum pennellii Sopen03g030000 nuclear factor Y, subunit C4 (NF-YC4) | CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone , Histone-fold | BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C1 Spenn-ch03 + View
Solanum pennellii Sopen03g030580 Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues. | nuclear factor Y, subunit C1 (NF-YC1) | CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone , Histone-fold | BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C4 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400039636 Ccaat-binding transcription factor ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400015177 CONSTANS interacting protein 2a ST4.03ch03 - View
Selenicereus undatus Hund02445 Scaffold_33678 - View
Trochodendron aralioides TAR622G0989 group8 - View
Trochodendron aralioides TAR374G0980 group12 - View
Trochodendron aralioides TAR629G0626 group0 + View
Theobroma cacao Thecc.03G130100 Nuclear transcription factor Y subunit C-1 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104821522 nuclear transcription factor Y subunit C-1-like NW_010966459.1 - View
Tarenaya hassleriana THA.LOC109115972 nuclear transcription factor Y subunit C-1-like NW_010968505.1 + View
Tripterygium wilfordii TWI23G0098 NC_052239.1 + View
Tripterygium wilfordii TWI14G0831 NC_052249.1 - View
Vaccinium macrocarpon vmacro19118 Similar to NFYC4: Nuclear transcription factor Y subunit C-4 (Arabidopsis thaliana OX%3D3702) scaffold00373_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1342 CM024072.1 - View
Vitis vinifera GSVIVG01008570001 chr17 - View