Gene: Carub.0005s1478

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0005s1478
  • Transcript Identifier Carub.0005s1478.1
  • Gene Type Coding gene
  • Location scaffold_5 : 8052219-8053372 : negative

Gene Family Information

  • ID HOM05D000789
  • #Genes/#Species 750/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0005s1478.v1.1
  • pacid 39225359
  • synonym Carubv10017963m.g

Descriptions

  • Description K08066 - nuclear transcription factor Y, gamma (NFYC)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000306
ISO
PLAZA Integrative Orthologypositive regulation of photomorphogenesis AT3G48590
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G48590
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering Os03g0251350
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc06g072040.1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G48590
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G50480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G48590
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os08g0496500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR003958 Transcription factor CBF/NF-Y/archaeal histone domain
Mapman id Description
15.5.49.3 RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YC