Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G13360 LG-10 + View
Acer truncatum Atru.chr6.1819 chr6 + View
Arabidopsis lyrata AL5G40560 scaffold_5 + View
Avicennia marina MSTRG.14297 ScioBoG_18782_HRSCAF_18867 - View
Avicennia marina MSTRG.15056 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.6758 ScioBoG_102840_HRSCAF_103099 - View
Aquilegia oxysepala Aqoxy1G01895 CHR01 - View
Aquilegia oxysepala Aqoxy4G00189 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7U2XF6 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SLJ44W PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ES1ZP9 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FNSI1P PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT3G58780 K-box region and MADS-box transcription factor family protein One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells. SHATTERPROOF 1 (SHP1)%3B FUNCTIONS IN: protein binding%2C DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: fruit dehiscence%2C ovule development%2C carpel development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.1)%3B Has 7265 Blast hits to 7263 proteins in 918 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 648%3B Fungi - 306%3B Plants - 6235%3B Viruses - 0%3B Other Eukaryotes - 76 (source: NCBI BLink). SHATTERPROOF 1 (SHP1)%3B FUNCTIONS IN: protein binding%2C DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: fruit dehiscence%2C ovule development%2C carpel development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT2G42830.1). Chr3 + View
Brassica napus A07p24340 A07 + View
Brassica oleracea BolC3t20433H C3 + View
Brassica oleracea BolC8t51010H C8 + View
Capsicum annuum CAN.G585.57 PGAv.1.6.scaffold585 - View
Cannabis sativa CANSAT64G0313 NC_044379.1 - View
Corylus avellana Haze_13480 Similar to MADS1: Agamous-like MADS-box protein MADS1 (Vitis vinifera OX%3D29760) 5 + View
Coffea canephora Cc05_g09250 Floral homeotic protein AGAMOUS chr5 + View
Citrus clementina Ciclev10033829m.g scaffold_4 - View
Carpinus fangiana Cfa022918 scaffold13 - View
Cardamine hirsuta CARHR169170 Agamous MADS-box transcription factor Chr5 + View
Cardamine hirsuta CARHR137910 Agamous MADS-box transcription factor Chr4 + View
Citrullus lanatus ClCG02G018350 Agamous MADS-box transcription factor CG_Chr02 + View
Cucumis melo MELO3C002691.2 MADS box transcription factor AGAMOUS chr12 - View
Cucumis melo MELO3C007181.2 MADS box transcription factor AGAMOUS chr08 - View
Cucumis melo MELO3C019694.2 AGAMOUS MADS box factor transcription factor chr11 + View
Carica papaya Cpa.g.sc50.73 supercontig_50 + View
Capsella rubella Carub.0005s2556 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED scaffold_5 + View
Cucumis sativus L. CsaV3_6G015770 MADS box transcription factor AGAMOUS chr6 + View
Cucumis sativus L. CsaV3_6G051220 MADS box transcription factor AGAMOUS chr6 + View
Daucus carota DCAR_021307 hypothetical protein DCARv2_Chr6 - View
Durio zibethinus Duzib264G1243 NW_019167960.1 - View
Durio zibethinus Duzib147G1257 NW_019168470.1 + View
Eucalyptus grandis Eucgr.K01195 Chr11 + View
Eucalyptus grandis Eucgr.E02863 Chr05 - View
Eutrema salsugineum Thhalv10006196m.g PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED scaffold_19 - View
Eutrema salsugineum Thhalv10017047m.g PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED scaffold_10 + View
Fragaria x ananassa FAN14G3944 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Fvb6-1 + View
Fragaria x ananassa FAN02G3289 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Fvb6-4 + View
Fragaria x ananassa FAN09G4878 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Fvb6-2 - View
Fragaria x ananassa FAN16G2818 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Fvb3-3 - View
Fragaria vesca FvH4_6g37880 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D04G037800 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED D04 - View
Gossypium hirsutum Gohir.A05G377900 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED A05 + View
Glycine max Glyma.08G310100 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Gm08 - View
Glycine max Glyma.14G027251 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Gm14 + View
Glycine max Glyma.18G105800 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Gm18 + View
Glycine max Glyma.02G287700 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Gm02 - View
Gossypium raimondii Gorai.012G042600 Chr12 - View
Helianthus annuus HanXRQChr03g0091451 Probable AGAMOUS-like 104 HanXRQChr03 + View
Lupinus albus Lalb_Chr10g0106751 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Lalb_Chr10 - View
Lupinus albus Lalb_Chr04g0248701 PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Lalb_Chr04 + View
Lotus japonicus Lj6g0013579 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED chr6 - View
Lotus japonicus LjContig00310g0002600 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Contig00310 + View
Lonicera japonica Lj1A1178G69 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_27060 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Lsat_1_v8_lg_7 + View
Malus domestica MD17G1141300 K-box region and MADS-box transcription factor family protein Chr17 - View
Malus domestica MD05G1293700 K-box region and MADS-box transcription factor family protein Chr05 - View
Malus domestica MD09G1155200 K-box region and MADS-box transcription factor family protein Chr09 - View
Manihot esculenta Manes.01G128500 Chromosome01 - View
Manihot esculenta Manes.02G085501 Chromosome02 - View
Nicotiana tabacum Nitab4.5_0001121g0240 Transcription factor, MADS-box, Transcription factor, K-box Nitab4.5_0001121 + View
Petunia axillaris Peaxi162Scf00154g00516 MADS-box transcription factor 3 Peaxi162Scf00154 - View
Punica granatum PGR142G2120 NC_045128.1 - View
Prunus persica Prupe.3G170600 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Pp03 + View
Prunus persica Prupe.4G070500 PTHR11945:SF170 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 Pp04 + View
Papaver somniferum PSO541G4298 NC_039363.1 + View
Populus trichocarpa Potri.011G075800 PTHR11945:SF170 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 Chr11 + View
Phaseolus vulgaris Phvul.008G190600 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Chr08 + View
Phaseolus vulgaris Phvul.006G034300 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Chr06 - View
Quercus lobata QL08p043819 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0012431 RcHm_v2.0_Chr5 + View
Rosa chinensis RcHm_v2.0_Chr2g0151031 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim06G0119100 chr06 - View
Salvia bowleyana SalBow8G0272 GWHASIU00000004 + View
Sechium edule Sed0027248 LG01 + View
Sechium edule Sed0014035 LG05 + View
Solanum lycopersicum Solyc07g055920.4 Tomato AGAMOUS-like 1 SL4.0ch07 + View
Schrenkiella parvula Sp5g04060 PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED ch5-1 - View
Solanum pennellii Sopen02g020720 Floral homeotic protein AGAMOUS (NAG1) - Nicotiana tabacum (Common tobacco), Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs. | AGAMOUS (AG) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: stamen development, maintenance of floral organ identity, leaf development, carpel development | LOCATED IN: endomembrane system, nucleus | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein . Spenn-ch02 - View
Solanum pennellii Sopen07g029280 Floral homeotic protein AGAMOUS (GAG2) - Panax ginseng (Korean ginseng), One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells. | SHATTERPROOF 1 (SHP1) | FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: fruit dehiscence, ovule development, carpel development | LOCATED IN: nucleus | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein . Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400028442 Floral homeotic protein AGAMOUS ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400017295 TAGL1 transcription factor ST4.03ch07 + View
Trochodendron aralioides TAR626G0241 group3 + View
Theobroma cacao Thecc.01G160300 K-box region and MADS-box transcription factor family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104803144 agamous-like MADS-box protein AGL1 isoform X1 NW_010960188.1 + View
Vaccinium macrocarpon vmacro12448 Similar to MADS1: Agamous-like MADS-box protein MADS1 (Vitis vinifera OX%3D29760) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G0968 CM024073.1 - View
Vigna mungo VMungo0540G1953 CM024075.1 + View
Vitis vinifera GSVIVG01000802001 chr12 - View
Vitis vinifera GSVIVG01021303001 chr10 + View