Gene: Sopen02g020720

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g020720
  • Transcript Identifier Sopen02g020720.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 44448290-44453363 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g020720.1

Descriptions

  • Description Floral homeotic protein AGAMOUS (NAG1) - Nicotiana tabacum (Common tobacco), Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs. | AGAMOUS (AG) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: stamen development, maintenance of floral organ identity, leaf development, carpel development | LOCATED IN: endomembrane system, nucleus | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010097
ISO
PLAZA Integrative Orthologyspecification of stamen identity Os01g0201700
GO:0048440
ISO
PLAZA Integrative Orthologycarpel development AT4G18960
GO:0010582
ISO
PLAZA Integrative Orthologyfloral meristem determinacy Os05g0203800
GO:0048443
ISO
PLAZA Integrative Orthologystamen development AT4G18960
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G18960
GO:0048497
ISO
PLAZA Integrative Orthologymaintenance of floral organ identity AT4G18960
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT3G58780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G18960
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G58780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036879 Transcription factor, MADS-box superfamily
IPR002100 Transcription factor, MADS-box
IPR033896 MADS MEF2-like
IPR002487 Transcription factor, K-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)