Gene: MSTRG.6758

General Information

Structural Information

Species Avicennia marina
Gene Identifier MSTRG.6758
Transcript Identifier MSTRG.6758.1
Gene Type Coding gene
Location ScioBoG_102840_HRSCAF_103099 : 3473778-3484080 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000042
#Genes/#Species 4894/100
Phylogenetic origin

ID ORTHO05D000028
#Genes/#Species 3637/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

tid MSTRG.6758.1

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045944	IEA	InterPro	positive regulation of transcription by RNA polymerase II
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0048440	ISO	PLAZA Integrative Orthology	carpel development	AT2G42830
GO:0010154	ISO	PLAZA Integrative Orthology	fruit development	Solyc07g055920.4
GO:0009835	ISO	PLAZA Integrative Orthology	fruit ripening	Solyc07g055920.4
GO:0048481	ISO	PLAZA Integrative Orthology	plant ovule development	AT2G42830

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0046983	IEA	InterPro	protein dimerization activity
GO:0000977	IEA	InterPro	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT2G42830
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT2G42830

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	InterPro	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR033896	MADS MEF2-like
IPR002487	Transcription factor, K-box

Mapman id	Description
15.5.14	RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)