Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008216 PREDICTED: putative nuclear matrix constituent protein 1-like protein [Nicotiana tomentosiformis] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G16300 LG-1 - View
Acer truncatum Atru.chr3.1079 chr3 - View
Actinidia chinensis Actinidia36410 Lachesis_group4 + View
Actinidia chinensis Actinidia11953 Lachesis_group11 + View
Arabidopsis lyrata AL8G43490 scaffold_8 + View
Avicennia marina MSTRG.23648 ScioBoG_3895_HRSCAF_3912 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JN41X7 KOG1103//KOG4593 - Predicted coiled-coil protein // Mitotic checkpoint protein MAD1 arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT5G65770 little nuclei4 Encodes a protein that localizes to the nuclear periphery and affects nuclear morphology. LITTLE NUCLEI4 (LINC4)%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.2)%3B Has 212892 Blast hits to 104310 proteins in 3685 species: Archae - 2813%3B Bacteria - 44601%3B Metazoa - 88597%3B Fungi - 16519%3B Plants - 11430%3B Viruses - 898%3B Other Eukaryotes - 48034 (source: NCBI BLink). LITTLE NUCLEI4 (LINC4)%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) (TAIR:AT5G65780.2). Chr5 + View
Brassica carinata BcaC04g23249 ChrC04 - View
Brassica carinata BcaB04g20027 ChrB04 + View
Brassica carinata BcaC01g02835 ChrC01 - View
Brassica napus A09p09150 A09 + View
Brassica napus C03p59890 C03 - View
Brassica napus C09p10670 C09 + View
Brassica oleracea BolC9t53964H C9 + View
Brassica oleracea BolC3t18254H C3 - View
Brassica rapa BraA09t36567Z A09 + View
Capsicum annuum CAN.G1343.20 PGAv.1.6.scaffold1343 - View
Cannabis sativa CANSAT01G3006 NC_044373.1 + View
Cicer arietinum L. Ca_22089_v3 Ca_LG7_v3 + View
Corylus avellana Haze_03970 Similar to CRWN4: Protein CROWDED NUCLEI 4 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc07_g07520 Putative nuclear matrix constituent protein 1-like protein chr7 - View
Citrus clementina Ciclev10024751m.g scaffold_7 - View
Ceratophyllum demersum CDE06G1107 4 + View
Ceratophyllum demersum CDE04G2677 2 + View
Cardamine hirsuta CARHR279770 Branched-chain-amino-acid aminotransferase 5 Chr8 + View
Carya illinoinensis CiPaw.08G149100 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Chr08 + View
Carya illinoinensis CiPaw.07G038400 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Chr07 - View
Citrullus lanatus ClCG01G017910 Nuclear matrix constituent protein 2 CG_Chr01 - View
Cucumis melo MELO3C007665.2 Nuclear matrix constituent protein 1 chr08 - View
Carica papaya Cpa.g.sc129.57 supercontig_129 + View
Chenopodium quinoa AUR62007977 CRWN4: Protein CROWDED NUCLEI 4 C_Quinoa_Scaffold_2646 + View
Chenopodium quinoa AUR62003155 CRWN4: Protein CROWDED NUCLEI 4 C_Quinoa_Scaffold_1000 + View
Capsella rubella Carub.0008s2667 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_6G044430 protein CROWDED NUCLEI 4 chr6 - View
Daucus carota DCAR_025832 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv26969 GWHABJS00000014 - View
Davidia involucrata Dinv23061 GWHABJS00000021 - View
Durio zibethinus Duzib264G0128 NW_019167960.1 + View
Durio zibethinus Duzib147G1298 NW_019168470.1 + View
Erigeron canadensis ECA232G1830 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.I00661 Chr09 + View
Erythranthe guttata Migut.H00316 scaffold_8 + View
Eutrema salsugineum Thhalv10003578m.g PTHR31908:SF2 - NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED scaffold_6 - View
Fragaria x ananassa FAN19G2689 PTHR31908:SF2 - NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Fvb1-4 - View
Fragaria x ananassa FAN26G2388 KOG1937//KOG4568//KOG4593 - Uncharacterized conserved protein // Cytoskeleton-associated protein and related proteins // Mitotic checkpoint protein MAD1 Fvb1-2 - View
Fragaria x ananassa FAN23G0417 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Fvb1-3 - View
Fragaria x ananassa FAN28G2309 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Fvb1-1 + View
Fragaria vesca FvH4_1g18512 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Fvb1 - View
Gossypium hirsutum Gohir.A11G211100 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED A11 + View
Gossypium hirsutum Gohir.D03G031500 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED D03 - View
Gossypium hirsutum Gohir.D11G212000 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED D11 - View
Gossypium hirsutum Gohir.A02G148800 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED A02 + View
Glycine max Glyma.17G157900 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Gm17 + View
Glycine max Glyma.05G109300 KOG4809 - Rab6 GTPase-interacting protein involved in endosome-to-TGN transport Gm05 - View
Glycine max Glyma.11G045200 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Gm11 + View
Glycine max Glyma.01G196400 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Gm01 - View
Gossypium raimondii Gorai.003G033100 Chr03 - View
Gossypium raimondii Gorai.007G227800 Chr07 - View
Helianthus annuus HanXRQChr17g0567751 Probable little nuclei4 HanXRQChr17 + View
Lupinus albus Lalb_Chr16g0379031 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED Lalb_Chr16 - View
Lotus japonicus Lj4g0025248 PTHR31908//PTHR31908:SF2 - FAMILY NOT NAMED // NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED chr4 - View
Lonicera japonica Lj4A168T50 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_4_159441 Lsat_1_v8_lg_4 + View
Magnolia biondii MBI16_g11022_MAGBIO AED:0.14 Chr16 - View
Malus domestica MD15G1302600 little nuclei4 Chr15 - View
Malus domestica MD02G1191400 little nuclei4 Chr02 - View
Manihot esculenta Manes.12G118800 Chromosome12 - View
Manihot esculenta Manes.13G107600 Chromosome13 + View
Medicago truncatula Medtr4g097580 nuclear matrix constituent-like protein, putative chr4 - View
Nelumbo nucifera Nn6g34551 chr6 - View
Nicotiana tabacum Nitab4.5_0003478g0030 Unknown Nitab4.5_0003478 - View
Olea europaea Oeu061811.2 chr10 - View
Petunia axillaris Peaxi162Scf00096g01717 little nuclei4 Peaxi162Scf00096 + View
Punica granatum PGR004G0636 NC_045131.1 - View
Prunus persica Prupe.6G214100 Pp06 + View
Phaseolus vulgaris Phvul.003G232200 Chr03 + View
Quercus lobata QL06p038381 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0109151 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim10G0092900 chr10 + View
Striga asiatica SGA_v2.0_scaffold121G33074 scaffold121 - View
Salvia bowleyana SalBow3G2766 GWHASIU00000006 + View
Simmondsia chinensis Sc16g0000890 GWHAASQ00000016 + View
Sechium edule Sed0013236 LG10 - View
Sechium edule Sed0021007 LG14 - View
Solanum lycopersicum Solyc02g091960.4 Protein CROWDED NUCLEI 4 (AHRD V3.3 *-* A0A2G2XHM1_CAPBA) SL4.0ch02 + View
Schrenkiella parvula Sp2g28870 PTHR31908:SF2 - NUCLEAR MATRIX CONSTITUENT PROTEIN 1-LIKE PROTEIN-RELATED ch2-4 + View
Solanum pennellii Sopen02g036530 LITTLE NUCLEI4 (LINC4) | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) . Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400021400 Nuclear matrix constituent protein 2 ST4.03ch02 + View
Selenicereus undatus Hund16591 Scaffold_33677 - View
Trochodendron aralioides TAR381G1251 group11 - View
Trochodendron aralioides TAR625G0235 group4 - View
Theobroma cacao Thecc.01G078400 Little nuclei4 Chromosome_1 - View
Trifolium pratense TPR.G3699 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI77G0068 NC_052236.1 + View
Vaccinium macrocarpon vmacro05373 Similar to CRWN4: Protein CROWDED NUCLEI 4 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G3305 CM024069.1 + View