Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0036778 PREDICTED: pentatricopeptide repeat-containing protein At5g43790 [Vitis vinifera] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G17200 LG-10 + View
Aethionema arabicum Aa31LG1G20800 LG-1 - View
Aethionema arabicum Aa31LG5G3480 LG-5 + View
Acer truncatum Atru.chr4.2327 chr4 - View
Acer truncatum Atru.chr5.1526 chr5 + View
Actinidia chinensis Actinidia19963 Lachesis_group19 - View
Arabidopsis lyrata AL8G16380 scaffold_8 + View
Arabidopsis lyrata AL5G46220 scaffold_5 + View
Avicennia marina MSTRG.24736 ScioBoG_4088_HRSCAF_4107 - View
Amaranthus hybridus Ah.13g073600 AmaHy_arrow1_Scaffold_13 - View
Amaranthus hybridus Ah.11g050200 Pentatricopeptide repeat-containing protein At3g63370, chloroplastic (Protein ORGANELLE TRANSCRIPT PROCESSING 86) AmaHy_arrow1_Scaffold_11 - View
Aquilegia oxysepala Aqoxy2G03466 CHR02 + View
Arabidopsis thaliana AT3G63370 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1)%3B Has 48148 Blast hits to 13528 proteins in 241 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 44%3B Fungi - 62%3B Plants - 47536%3B Viruses - 0%3B Other Eukaryotes - 502 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB02g08063 ChrB02 - View
Brassica napus C04p29900 C04 - View
Brassica oleracea BolC4t24521H C4 - View
Cicer arietinum L. Ca_09725_v3 Ca_LG4_v3 - View
Coffea canephora Cc01_g18980 Pentatricopeptide repeat-containing protein At3g63370 chr1 - View
Citrus clementina Ciclev10024388m.g scaffold_3 - View
Cardamine hirsuta CARHR179690 Pentatricopeptide repeat-containing protein Chr6 + View
Cardamine hirsuta CARHR291600 Pentatricopeptide repeat-containing protein NSCAFB.271 - View
Carya illinoinensis CiPaw.02G119600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 - View
Carya illinoinensis CiPaw.08G109800 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr08 + View
Citrullus lanatus ClCG02G016620 Pentatricopeptide repeat-containing protein CG_Chr02 + View
Cucumis melo MELO3C006512.2 Pentatricopeptide repeat-containing family protein chr06 + View
Cucumis melo MELO3C004379.2 Pentatricopeptide repeat-containing family protein chr05 + View
Carica papaya Cpa.g.sc44.131 supercontig_44 + View
Carica papaya Cpa.g.sc52.123 supercontig_52 + View
Chenopodium quinoa AUR62011969 PCMP-H83: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic C_Quinoa_Scaffold_2008 - View
Chenopodium quinoa AUR62032281 PCMP-H83: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic C_Quinoa_Scaffold_1762 - View
Daucus carota DCAR_002699 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv22499 GWHABJS00000007 + View
Davidia involucrata Dinv04718 GWHABJS00000005 - View
Durio zibethinus Duzib138G1818 NW_019167893.1 + View
Erigeron canadensis ECA248G1254 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.B01053 Chr02 + View
Eucalyptus grandis Eucgr.H03410 Chr08 - View
Eucalyptus grandis Eucgr.K03322 Chr11 - View
Erythranthe guttata Migut.D00354 scaffold_4 - View
Eutrema salsugineum Thhalv10003201m.g PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_17 + View
Fragaria x ananassa FAN14G2312 Fvb6-1 + View
Fragaria x ananassa FAN20G1983 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-3 - View
Fragaria x ananassa FAN15G0130 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-4 - View
Fragaria x ananassa FAN24G2087 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-2 + View
Fragaria x ananassa FAN27G2871 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-1 + View
Fragaria vesca FvH4_2g22910 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2 - View
Gossypium hirsutum Gohir.D08G072300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D08 - View
Gossypium hirsutum Gohir.A08G063800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A08 - View
Gossypium hirsutum Gohir.A09G219901 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A09 + View
Gossypium hirsutum Gohir.D09G222100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D09 + View
Glycine max Glyma.10G030200 Gm10 + View
Glycine max Glyma.02G144100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm02 - View
Gossypium raimondii Gorai.006G243300 Chr06 + View
Hydrangea macrophylla Hma1.2p1_0172F.1_g076040 Hma1.2p1_0172F.1 + View
Lupinus albus Lalb_Chr03g0037541 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr03 + View
Lupinus albus Lalb_Chr21g0306331 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr21 - View
Lotus japonicus Lj5g0004359 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr5 - View
Lonicera japonica Lj2P1164T18 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_5_185321 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_5 - View
Magnolia biondii MBI04_g31871_MAGBIO AED:0.34 Chr04 + View
Malus domestica MD11G1278400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr11 - View
Manihot esculenta Manes.01G203700 Chromosome01 - View
Medicago truncatula Medtr1g041310 pentatricopeptide (PPR) repeat protein chr1 - View
Medicago truncatula Medtr1g071240 pentatricopeptide (PPR) repeat protein chr1 - View
Nelumbo nucifera Nn1g02465 chr1 + View
Olea europaea Oeu018415.1 chr16 + View
Olea europaea Oeu025766.1 chr16 + View
Olea europaea Oeu023975.1 chr1 - View
Oryza sativa ssp. japonica Os11g0583200 Hypothetical conserved gene. chr11 + View
Punica granatum PGR004G1397 NC_045131.1 + View
Punica granatum PGR044G0810 NC_045134.1 - View
Prunus persica Prupe.8G234400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp08 - View
Pisum sativum Psat6g058800 DYW family of nucleic acid deaminases chr6LG2 - View
Papaver somniferum PSO461G0051 NW_020646638.1 + View
Papaver somniferum PSO210G6834 NC_039359.1 - View
Populus trichocarpa Potri.005G215500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr05 + View
Quercus lobata QL12p042349 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0289871 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim13G0028900 chr13 + View
Striga asiatica SGA_v2.0_scaffold101G29744 scaffold101 + View
Salvia bowleyana SalBow6G3788 GWHASIU00000002 + View
Salvia bowleyana SalBow4G2584 GWHASIU00000008 - View
Salvia bowleyana SalBow4G0448 GWHASIU00000008 - View
Salix brachista Sabra05G0164700 GWHAAZH00000005 + View
Salix brachista Sabra02G0038800 GWHAAZH00000002 - View
Salix brachista Sabra10G0057500 GWHAAZH00000010 + View
Simmondsia chinensis Sc05g0001330 GWHAASQ00000005 + View
Simmondsia chinensis Sc13g0004810 GWHAASQ00000013 + View
Solanum lycopersicum Solyc06g053850.4 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QTR8_9MAGN) SL4.0ch06 - View
Solanum lycopersicum Solyc09g065710.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2X5Z3_CAPBA) SL4.0ch09 + View
Schrenkiella parvula Sp5g00180 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch5-1 - View
Schrenkiella parvula Sp2g08600 PF01535 - PPR repeat (PPR) ch2-4 - View
Solanum pennellii Sopen09g027460 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400019340 Pentatricopeptide repeat-containing protein ST4.03ch09 + View
Solanum tuberosum PGSC0003DMG400016279 Pentatricopeptide repeat-containing protein ST4.03ch06 - View
Trochodendron aralioides TAR365G1054 group16 + View
Trochodendron aralioides TAR365G0450 group16 + View
Trochodendron aralioides TAR365G0181 group16 - View
Trochodendron aralioides TAR633G2070 group2 - View
Theobroma cacao Thecc.01G271100 Tetratricopeptide repeat-like superfamily protein Chromosome_1 - View
Theobroma cacao Thecc.04G240300 Pentatricopeptide repeat superfamily protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104817568 pentatricopeptide repeat-containing protein At3g63370%2C chloroplastic NW_010965946.1 + View
Tripterygium wilfordii TWI09G0117 NC_052245.1 + View
Tripterygium wilfordii TWI73G0258 NC_052232.1 + View
Tripterygium wilfordii TWI12G0148 NC_052243.1 + View
Utricularia gibba unitig_32.g10828 unitig_32 + View
Vaccinium macrocarpon vmacro02614 Similar to PCMP-H83: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vanilla planifolia HPP92_005183 Pentatricopeptide repeat-containing protein *** CM028151.1 + View