Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001445 unnamed protein product [Coffea canephora] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G1950 LG-4 - View
Actinidia chinensis Actinidia37109 Lachesis_group9 - View
Arabidopsis lyrata AL2G39500 scaffold_2 + View
Avicennia marina MSTRG.14535 ScioBoG_18782_HRSCAF_18867 + View
Avicennia marina MSTRG.7052 ScioBoG_102840_HRSCAF_103099 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9QX17Y K03541 - photosystem II 10kDa protein (psbR) arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HCTL36 K03541 - photosystem II 10kDa protein (psbR) arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT1G79040 photosystem II subunit R Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII%2C particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn%2C assembly of PsbR is dependent on the presence of PsbJ. photosystem II subunit R (PSBR)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: photosystem II oxygen evolving complex assembly%2C photosynthesis%2C response to light intensity%3B LOCATED IN: thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%2C photosystem II%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814)%3B Has 134 Blast hits to 134 proteins in 52 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 129%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC08g47468 ChrC08 + View
Brassica carinata BcaB02g07194 ChrB02 + View
Brassica carinata BcaC08g45389 ChrC08 - View
Brassica napus A07p44190 A07 + View
Brassica napus C06p30200 C06 - View
Brassica napus C06p52920 C06 + View
Brassica oleracea BolC6t38183H C6 - View
Brassica oleracea BolC6t40310H C6 + View
Brassica rapa BraA07t31927Z A07 + View
Beta vulgaris EL10Ac4g08547 K03541 - photosystem II 10kDa protein (psbR) Chr4_EL10_PGA_scaffold1 + View
Capsicum annuum CAN.G943.25 PGAv.1.6.scaffold943 + View
Cicer arietinum L. Ca_03704_v3 Ca_LG1_v3 - View
Corylus avellana Haze_08525 Similar to PSBR: Photosystem II 10 kDa polypeptide, chloroplastic (Solanum lycopersicum OX%3D4081) 4 + View
Coffea canephora Cc05_g15930 Photosystem II 10 kDa polypeptide, chloroplastic chr5 + View
Citrus clementina Ciclev10022793m.g scaffold_3 + View
Ceratophyllum demersum CDE11G0376 9 + View
Carya illinoinensis CiPaw.11G067100 K03541 - photosystem II 10kDa protein (psbR) Chr11 - View
Citrullus lanatus ClCG11G016280 Photosystem II 10 kDa polypeptide family protein CG_Chr11 + View
Daucus carota DCAR_016816 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_013749 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_009633 hypothetical protein DCARv2_Chr3 + View
Durio zibethinus Duzib187G1376 NW_019167860.1 - View
Erigeron canadensis ECA236G0888 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.F01447 Chr06 + View
Eucalyptus grandis Eucgr.F03186 Chr06 - View
Erythranthe guttata Migut.H01700 scaffold_8 - View
Fragaria x ananassa FAN21G1818 K03541 - photosystem II 10kDa protein (psbR) Fvb3-2 - View
Fragaria x ananassa FAN25G3309 K03541 - photosystem II 10kDa protein (psbR) Fvb3-1 + View
Fragaria x ananassa FAN11G1612 K03541 - photosystem II 10kDa protein (psbR) Fvb3-4 + View
Fragaria vesca FvH4_3g16050 K03541 - photosystem II 10kDa protein (psbR) Fvb3 - View
Gossypium hirsutum Gohir.D01G024400 PTHR34369//PTHR34369:SF2 - FAMILY NOT NAMED // PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC D01 + View
Gossypium hirsutum Gohir.A01G037100 PTHR34369//PTHR34369:SF2 - FAMILY NOT NAMED // PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC A01 + View
Glycine max Glyma.15G253700 K03541 - photosystem II 10kDa protein (psbR) Gm15 + View
Glycine max Glyma.08G173700 K03541 - photosystem II 10kDa protein (psbR) Gm08 + View
Gossypium raimondii Gorai.009G354500 Chr09 - View
Gossypium raimondii Gorai.002G032900 Chr02 + View
Helianthus annuus HanXRQChr05g0160651 Putative photosystem II PsbR HanXRQChr05 - View
Helianthus annuus HanXRQChr08g0232801 Probable photosystem II 10 kDa polypeptide, chloroplastic HanXRQChr08 - View
Hydrangea macrophylla Hma1.2p1_0321F.1_g124500 Hma1.2p1_0321F.1 + View
Lupinus albus Lalb_Chr25g0285191 K03541 - photosystem II 10kDa protein (psbR) Lalb_Chr25 - View
Lupinus albus Lalb_Chr01g0015971 K03541 - photosystem II 10kDa protein (psbR) Lalb_Chr01 - View
Lotus japonicus Lj3g0019499 K03541 - photosystem II 10kDa protein (psbR) chr3 + View
Lactuca sativa Lsat_1_v5_gn_7_116120 K03541 - photosystem II 10kDa protein (psbR) Lsat_1_v8_lg_7 - View
Malus domestica MD05G1215200 photosystem II subunit R Chr05 + View
Malus domestica MD10G1198300 photosystem II subunit R Chr10 + View
Manihot esculenta Manes.03G082900 Chromosome03 - View
Medicago truncatula Medtr2g064650 photosystem II 10 kDa proteinPsbR protein chr2 - View
Olea europaea Oeu002809.1 chr10 + View
Petunia axillaris Peaxi162Scf00232g01129 Photosystem II 10 kDa polypeptide, chloroplastic Peaxi162Scf00232 + View
Petunia axillaris Peaxi162Scf00006g00149 Unknown protein Peaxi162Scf00006 - View
Punica granatum PGR083G0343 NC_045133.1 + View
Prunus persica Prupe.4G143700 K03541 - photosystem II 10kDa protein (psbR) Pp04 - View
Pisum sativum Psat1g002320 Photosystem II 10 kDa polypeptide PsbR chr1LG6 + View
Populus trichocarpa Potri.011G142200 K03541 - photosystem II 10kDa protein (psbR) Chr11 + View
Phaseolus vulgaris Phvul.005G055200 K03541 - photosystem II 10kDa protein (psbR) Chr05 + View
Quercus lobata QL04p074767 4 - View
Rosa chinensis RcHm_v2.0_Chr5g0027021 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim04G0006200 chr04 - View
Striga asiatica SGA_v2.0_scaffold49G18168 scaffold49 + View
Salvia bowleyana SalBow8G0430 GWHASIU00000004 + View
Solanum lycopersicum Solyc07g066310.3 Photosystem II 10 kDa polypeptide, chloroplastic (AHRD V3.3 *** A0A2G3C3G4_CAPCH) SL4.0ch07 + View
Schrenkiella parvula Sp5g34090 K03541 - photosystem II 10kDa protein (psbR) ch5-7 + View
Solanum pennellii Sopen07g034490 Photosystem II 10 kDa polypeptide, chloroplast precursor (Light-inducible tissue-specific ST-LS1 protein) - Solanum tuberosum (Potato), Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ. | photosystem II subunit R (PSBR) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400022241 Photosystem II 10 kDa polypeptide, chloroplastic ST4.03ch07 + View
Theobroma cacao Thecc.07G156900 Photosystem II subunit R Chromosome_7 - View
Tarenaya hassleriana THA.LOC104812349 photosystem II 10 kDa polypeptide%2C chloroplastic NW_010965372.1 + View
Tripterygium wilfordii TWI38G0568 NC_052252.1 + View
Tripterygium wilfordii TWI38G0625 NC_052252.1 + View
Utricularia gibba unitig_8.g4771 unitig_8 - View
Vaccinium macrocarpon vmacro11652 Similar to PSBR: Photosystem II 10 kDa polypeptide, chloroplastic (Solanum lycopersicum OX%3D4081) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09788 Similar to PSBR: Photosystem II 10 kDa polypeptide, chloroplastic (Solanum tuberosum OX%3D4113) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G1647 CM024079.1 - View
Vitis vinifera GSVIVG01020484001 chr19 + View