Gene: AT1G79040

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G79040
  • Transcript Identifier AT1G79040.1
  • Gene Type Coding gene
  • Location Chr1 : 29736085-29736781 : positive

Gene Family Information

  • ID HOM05D004382
  • #Genes/#Species 163/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G79040.1
  • symbol PSBR
  • uniprot P27202

Descriptions

  • Description photosystem II subunit R
  • Computational description photosystem II subunit R (PSBR); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II oxygen evolving complex assembly, photosynthesis, response to light intensity; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, photosystem II; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbR (InterPro:IPR006814); Has 134 Blast hits to 134 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
IEA
GOA Databasephotosynthesis
GO:0015979
IEA
InterProphotosynthesis
GO:0010270
IEP
Gene Ontologyphotosystem II oxygen evolving complex assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid4
GO:0042651
IEA
GOA Databasethylakoid membrane
GO:0042651
IEA
InterProthylakoid membrane
GO:0009654
IEA
Gene Ontologyphotosystem II oxygen evolving complex
GO:0009654
IEA
InterProphotosystem II oxygen evolving complex
GO:0009523
IEA
GOA Databasephotosystem II
GO:0009523
IEA
InterProphotosystem II
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast5
GO:0009536
IEA
GOA Databaseplastid
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid6
GO:0009535
IDA
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane7
GO:0005739
HDA
Gene Ontologymitochondrion8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006814 Photosystem II PsbR
Mapman id Description
1.1.1.2.8 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbR