Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG5G16850 | LG-5 | - | View | |
Acer truncatum | Atru.chr5.1283 | chr5 | + | View | |
Actinidia chinensis | Actinidia32382 | Lachesis_group18 | - | View | |
Actinidia chinensis | Actinidia00700 | Lachesis_group19 | - | View | |
Actinidia chinensis | Actinidia00057 | Lachesis_group10 | + | View | |
Arabidopsis lyrata | AL3G17290 | scaffold_3 | - | View | |
Avicennia marina | MSTRG.21820 | ScioBoG_3008_HRSCAF_3015 | + | View | |
Avicennia marina | MSTRG.18193 | ScioBoG_22153_HRSCAF_22259 | + | View | |
Aquilegia oxysepala | Aqoxy2G03134 | CHR02 | + | View | |
Arabidopsis thaliana | AT3G06350 | dehydroquinate dehydratase, putative / shikimate dehydrogenase Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway. MATERNAL EFFECT EMBRYO ARREST 32 (MEE32)%3B FUNCTIONS IN: NADP or NADPH binding%2C 3-dehydroquinate dehydratase activity%2C shikimate 5-dehydrogenase activity%2C binding%2C catalytic activity%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151)%2C Aldolase-type TIM barrel (InterPro:IPR013785)%2C Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342)%2C NAD(P)-binding domain (InterPro:IPR016040)%2C Dehydroquinase class I (InterPro:IPR001381)%2C Shikimate dehydrogenase substrate binding%2C N-terminal (InterPro:IPR013708)%3B Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507%3B Bacteria - 10604%3B Metazoa - 0%3B Fungi - 391%3B Plants - 114%3B Viruses - 0%3B Other Eukaryotes - 2839 (source: NCBI BLink). | Chr3 | - | View |
Amborella trichopoda | ATR0706G111 | AmTr_v1.0_scaffold00057 | - | View | |
Brassica carinata | BcaC05g29808 | ChrC05 | - | View | |
Brassica napus | A05p41690 | A05 | + | View | |
Brassica napus | C05p60900 | C05 | + | View | |
Brassica oleracea | BolC5t34746H | C5 | + | View | |
Brassica rapa | BraA05t22888Z | A05 | + | View | |
Capsicum annuum | CAN.G223.1 | PGAv.1.6.scaffold223 | - | View | |
Cannabis sativa | CANSAT25G2405 | NC_044370.1 | - | View | |
Corylus avellana | Haze_01045 | Similar to EMB3004: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (Arabidopsis thaliana OX%3D3702) | 1 | - | View |
Coffea canephora | Cc03_g02470 | Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic | chr3 | + | View |
Coffea canephora | Cc01_g20200 | Putative Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic | chr1 | - | View |
Citrus clementina | Ciclev10000874m.g | scaffold_5 | + | View | |
Citrus clementina | Ciclev10020342m.g | scaffold_3 | - | View | |
Citrus clementina | Ciclev10004711m.g | scaffold_9 | + | View | |
Ceratophyllum demersum | CDE01G0446 | 11 | - | View | |
Carpinus fangiana | Cfa006038 | Cfa02 | + | View | |
Cardamine hirsuta | CARHR080870 | Shikimate dehydrogenase, putative | Chr3 | - | View |
Carya illinoinensis | CiPaw.01G154500 | 1.1.1.25//4.2.1.10 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase // 3-dehydroquinate dehydratase | Chr01 | + | View |
Carya illinoinensis | CiPaw.02G087400 | 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase | Chr02 | + | View |
Carya illinoinensis | CiPaw.07G099500 | PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED | Chr07 | - | View |
Corchorus olitorius | COL.COLO4_13942 | Dehydroquinase class I | AWUE01015340.1 | + | View |
Carica papaya | Cpa.g.sc16.98 | supercontig_16 | - | View | |
Chenopodium quinoa | AUR62000914 | EMB3004: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic | C_Quinoa_Scaffold_2088 | - | View |
Chenopodium quinoa | AUR62005055 | aroD: 3-dehydroquinate dehydratase | C_Quinoa_Scaffold_3820 | + | View |
Capsella rubella | Carub.0003s0578 | PTHR21089//PTHR21089:SF12 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED | scaffold_3 | - | View |
Daucus carota | DCAR_002786 | hypothetical protein | DCARv2_Chr1 | - | View |
Daucus carota | DCAR_027114 | hypothetical protein | DCARv2_Chr8 | - | View |
Daucus carota | DCAR_030572 | hypothetical protein | DCARv2_Chr9 | + | View |
Davidia involucrata | Dinv01282 | GWHABJS00000002 | + | View | |
Davidia involucrata | Dinv38333 | GWHABJS00000016 | - | View | |
Davidia involucrata | Dinv32991 | GWHABJS00000010 | - | View | |
Davidia involucrata | Dinv44437 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib212G0910 | NW_019168026.1 | + | View | |
Durio zibethinus | Duzib151G0205 | NW_019167904.1 | - | View | |
Eutrema salsugineum | Thhalv10020322m.g | 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase | scaffold_13 | + | View |
Fragaria x ananassa | FAN14G5501 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | Fvb6-1 | - | View |
Fragaria x ananassa | FAN05G4294 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | Fvb6-3 | - | View |
Fragaria x ananassa | FAN02G1712 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | Fvb6-4 | + | View |
Fragaria x ananassa | FAN09G4618 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | Fvb6-2 | - | View |
Gossypium hirsutum | Gohir.A11G118200 | PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED | A11 | + | View |
Gossypium hirsutum | Gohir.A09G061500 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | A09 | - | View |
Gossypium hirsutum | Gohir.D11G123100 | PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED | D11 | + | View |
Gossypium hirsutum | Gohir.D09G060500 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | D09 | - | View |
Glycine max | Glyma.20G230300 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | Gm20 | + | View |
Glycine max | Glyma.03G242400 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | Gm03 | - | View |
Glycine max | Glyma.10G158350 | PTHR21089//PTHR21089:SF12 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED | Gm10 | - | View |
Gossypium raimondii | Gorai.006G075100 | Chr06 | - | View | |
Gossypium raimondii | Gorai.007G132000 | Chr07 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0078F.1_g040870 | Hma1.2p1_0078F.1 | + | View | |
Lonicera japonica | Lj1A39T32 | GWHAAZE00000001 | + | View | |
Lonicera japonica | Lj6A668G44 | GWHAAZE00000006 | - | View | |
Lonicera japonica | Lj3C811G14 | GWHAAZE00000003 | - | View | |
Manihot esculenta | Manes.09G160900 | Chromosome09 | + | View | |
Manihot esculenta | Manes.05G068500 | Chromosome05 | + | View | |
Nelumbo nucifera | Nn3g21269 | chr3 | - | View | |
Nelumbo nucifera | Nn4g26051 | chr4 | - | View | |
Olea europaea | Oeu010966.1 | scaffold1416 | - | View | |
Olea europaea | Oeu029278.1 | scaffold244 | + | View | |
Oryza sativa ssp. japonica | Os12g0534000 | Similar to Dehydroquinate dehydratase/shikimate:NADP oxidoreductase (EC 4.2.1.10) (EC 1.1.1.25). | chr12 | - | View |
Petunia axillaris | Peaxi162Scf01067g00113 | dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative | Peaxi162Scf01067 | - | View |
Punica granatum | PGR083G1246 | NC_045133.1 | - | View | |
Populus trichocarpa | Potri.008G196100 | PTHR21089:SF1 - BIFUNCTIONAL 3-DEHYDROQUINATE DEHYDRATASE/SHIKIMATE DEHYDROGENASE, CHLOROPLASTIC | Chr08 | - | View |
Populus trichocarpa | Potri.014G135500 | PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED | Chr14 | + | View |
Populus trichocarpa | Potri.010G019000 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | Chr10 | - | View |
Populus trichocarpa | Potri.013G029800 | K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) | Chr13 | - | View |
Populus trichocarpa | Potri.005G043400 | PTHR21089//PTHR21089:SF10 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED | Chr05 | - | View |
Quercus lobata | QL12p023909 | 12 | - | View | |
Quercus lobata | QL06p006997 | 6 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr3g0453131 | RcHm_v2.0_Chr3 | + | View | |
Rhododendron simsii | Rhsim13G0017300 | chr13 | + | View | |
Rhododendron simsii | Rhsim02G0014200 | chr02 | + | View | |
Striga asiatica | SGA_v2.0_scaffold89G27561 | scaffold89 | + | View | |
Salvia bowleyana | SalBow3G0572 | GWHASIU00000006 | - | View | |
Salix brachista | Sabra13G0029900 | GWHAAZH00000013 | - | View | |
Salix brachista | Sabra10G0010400 | GWHAAZH00000010 | - | View | |
Salix brachista | Sabra14G0101100 | GWHAAZH00000014 | + | View | |
Simmondsia chinensis | Sc19g0004890 | GWHAASQ00000019 | - | View | |
Simmondsia chinensis | Sc09g0003580 | GWHAASQ00000009 | + | View | |
Solanum lycopersicum | Solyc01g067750.3 | dehydroquinate dehydratase/shikimate:NADP oxidoreductase | SL4.0ch01 | + | View |
Schrenkiella parvula | Sp3g05260 | 1.1.1.25//4.2.1.10 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase // 3-dehydroquinate dehydratase | ch3-1 | - | View |
Solanum pennellii | Sopen01g029700 | MATERNAL EFFECT EMBRYO ARREST 32 (MEE32) | FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity | INVOLVED IN: embryo development ending in seed dormancy | LOCATED IN: chloroplast stroma, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase , Aldolase-type TIM barrel , Quinate/shikimate 5-dehydrogenase , NAD(P)-binding domain , Dehydroquinase class I , Shikimate dehydrogenase substrate binding, N-terminal | Spenn-ch01 | + | View |
Trochodendron aralioides | TAR365G0277 | group16 | - | View | |
Trochodendron aralioides | TAR633G2708 | group2 | - | View | |
Trochodendron aralioides | TAR636G2251 | group1 | - | View | |
Trochodendron aralioides | TAR362G0967 | group17 | + | View | |
Theobroma cacao | Thecc.04G275800 | Dehydroquinate dehydratase / shikimate dehydrogenas | Chromosome_4 | - | View |
Tarenaya hassleriana | THA.LOC104818839 | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase%2C chloroplastic | NW_010966177.1 | - | View |
Tripterygium wilfordii | TWI73G0800 | NC_052232.1 | + | View | |
Vaccinium macrocarpon | vmacro15269 | Similar to EMB3004: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr4_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vaccinium macrocarpon | vmacro02509 | Similar to EMB3004: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01017822001 | chr5 | + | View | |
Vitis vinifera | GSVIVG01021979001 | chr14 | - | View | |
Zea mays | Zm00001eb410660 | Zm00001e039727 shikimate dehydrogenase1 | 10 | + | View |