Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022364 hypothetical protein VITISV_020293 [Vitis vinifera] Contig119 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G7580 LG-2 - View
Acer truncatum Atru.chr6.225 chr6 + View
Actinidia chinensis Actinidia01636 Lachesis_group26 - View
Actinidia chinensis Actinidia26195 Lachesis_group7 - View
Arabidopsis lyrata AL5G11830 scaffold_5 + View
Avicennia marina MSTRG.16466 ScioBoG_19743_HRSCAF_19834 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TT7XH0 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F0HWYS K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT2G02560 cullin-associated and neddylation dissociated Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin%2C but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1%2C namely%2C short petioles%2C downwardly curling leaves%2C shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1. cullin-associated and neddylation dissociated (CAND1)%3B FUNCTIONS IN: binding%3B INVOLVED IN: xylem and phloem pattern formation%2C response to auxin stimulus%2C vegetative to reproductive phase transition of meristem%3B LOCATED IN: cell wall%2C plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%2C TATA-binding protein interacting (TIP20) (InterPro:IPR013932)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). cullin-associated and neddylation dissociated (CAND1)%3B FUNCTIONS IN: binding%3B INVOLVED IN: xylem and phloem pattern formation%2C response to auxin stimulus%2C vegetative to reproductive phase transition of meristem%3B LOCATED IN: cell wall%2C plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%2C TATA-binding protein interacting (TIP20) (InterPro:IPR013932)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR1089G109 AmTr_v1.0_scaffold00099 - View
Brassica carinata BcaC03g17156 ChrC03 + View
Brassica napus A02p33040 A02 + View
Brassica napus C02p50810 C02 + View
Brassica oleracea BolC2t11162H C2 + View
Brassica rapa BraA02t08325Z A02 + View
Beta vulgaris EL10Ac6g13982 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G855.55 PGAv.1.6.scaffold855 - View
Cicer arietinum L. Ca_13528_v3 Ca_LG5_v3 + View
Corylus avellana Haze_09982 Similar to CAND1: Cullin-associated NEDD8-dissociated protein 1 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc02_g23620 Cullin-associated NEDD8-dissociated protein 1 chr2 - View
Citrus clementina Ciclev10000063m.g scaffold_5 + View
Carpinus fangiana Cfa004441 Cfa02 + View
Cardamine hirsuta CARHR145090 Cullin-associated NEDD8-dissociated protein 1 Chr5 + View
Carya illinoinensis CiPaw.05G001400 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) Chr05 + View
Cucumis melo MELO3C016463.2 Cullin-associated NEDD8-dissociated protein 1 chr06 - View
Carica papaya Cpa.g.sc173.13 supercontig_173 + View
Capsella rubella Carub.0005s0156 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) scaffold_5 + View
Cucumis sativus L. CsaV3_3G006660 cullin-associated NEDD8-dissociated protein 1 chr3 - View
Davidia involucrata Dinv29680 GWHABJS00000002 + View
Davidia involucrata Dinv29635 GWHABJS00000005 - View
Eucalyptus grandis Eucgr.G00074 Chr07 + View
Erythranthe guttata Migut.B00720 scaffold_2 + View
Eutrema salsugineum Thhalv10003535m.g K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) scaffold_6 - View
Glycine max Glyma.07G272400 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) Gm07 + View
Glycine max Glyma.17G002000 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) Gm17 - View
Lotus japonicus Lj4g0008829 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) chr4 - View
Lonicera japonica Lj5C285G4 GWHAAZE00000005 + View
Magnolia biondii MBI06_g14248_MAGBIO AED:0.25 Chr06 + View
Manihot esculenta Manes.07G030800 Chromosome07 - View
Medicago truncatula Medtr4g134620 cullin-associated NEDD8-dissociated protein chr4 + View
Petunia axillaris Peaxi162Scf00011g01927 Cullin-associated NEDD8-dissociated protein 1 Peaxi162Scf00011 - View
Punica granatum PGR042G3714 NC_045130.1 + View
Papaver somniferum PSO210G7577 NC_039359.1 + View
Populus trichocarpa Potri.004G229300 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) Chr04 - View
Populus trichocarpa Potri.003G000500 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) Chr03 + View
Rhododendron simsii Rhsim05G0115300 chr05 + View
Striga asiatica SGA_v2.0_scaffold254G45235 scaffold254 + View
Salix brachista Sabra01G0174400 GWHAAZH00000001 - View
Salix brachista Sabra03G0000100 GWHAAZH00000003 + View
Solanum lycopersicum Solyc01g103010.4 Cullin-associated NEDD8-dissociated protein 1 (AHRD V3.3 *** A0A2G2W8I3_CAPBA) SL4.0ch01 + View
Schrenkiella parvula Sp2g13790 K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) ch2-4 + View
Solanum pennellii Sopen01g045420 Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1. | cullin-associated and neddylation dissociated (CAND1) | FUNCTIONS IN: binding | INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, vegetative to reproductive phase transition of meristem | LOCATED IN: cell wall, plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Armadillo-like helical , Armadillo-type fold , TATA-binding protein interacting (TIP20) Spenn-ch01 + View
Selenicereus undatus Hund15376 Scaffold_33677 - View
Theobroma cacao Thecc.06G018800 Cullin-associated and neddylation dissociated Chromosome_6 - View
Trifolium pratense TPR.G6014 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI59G0557 NC_052248.1 + View
Tripterygium wilfordii TWI14G1077 NC_052249.1 + View
Vaccinium macrocarpon vmacro19829 Similar to CAND1: Cullin-associated NEDD8-dissociated protein 1 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2990 CM024074.1 + View
Vitis vinifera GSVIVG01023143001 chr12 - View