Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0038871 PREDICTED: E2F transcription factor-like E2FF isoform X1 [Vitis vinifera] Chr2 - View
CSS0039267 PREDICTED: E2F transcription factor-like E2FF isoform X2 [Vitis vinifera] Contig611 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.2396 chr9 + View
Acer truncatum Atru.chr6.2163 chr6 + View
Actinidia chinensis Actinidia36055 Lachesis_group4 + View
Actinidia chinensis Actinidia06050 Lachesis_group11 + View
Actinidia chinensis Actinidia33036 Lachesis_group13 + View
Actinidia chinensis Actinidia04956 Lachesis_group1 - View
Arabidopsis lyrata AL6G25760 scaffold_6 + View
Arabidopsis lyrata AL3G10880 scaffold_3 + View
Avicennia marina MSTRG.3201 ScioBoG_102835_HRSCAF_103059 + View
Aquilegia oxysepala Aqoxy3G03137 CHR03 - View
Aquilegia oxysepala Aqoxy3G00873 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C6R171 K09391 - transcription factor E2F7/8 (E2F7_8) arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT5G14960 DP-E2F-like 2 DP-E2F-like 2 (DEL2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316)%2C E2F Family (InterPro:IPR015633)%3B BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1)%3B Has 936 Blast hits to 860 proteins in 115 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 583%3B Fungi - 5%3B Plants - 220%3B Viruses - 0%3B Other Eukaryotes - 128 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G01330 DP-E2F-like protein 3 Member of the E2F transcription factors%2C (cell cycle genes)%2C key components of the cyclin D/retinoblastoma/E2F pathway. DP-E2F-like protein 3 (DEL3)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%2C cytoplasm%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316)%2C E2F Family (InterPro:IPR015633)%3B BEST Arabidopsis thaliana protein match is: DP-E2F-like 2 (TAIR:AT5G14960.1)%3B Has 1046 Blast hits to 870 proteins in 117 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 638%3B Fungi - 7%3B Plants - 262%3B Viruses - 0%3B Other Eukaryotes - 135 (source: NCBI BLink). Chr3 - View
Brassica napus A05p44660 A05 + View
Brassica napus C09p75240 C09 + View
Brassica oleracea BolC5t35140H C5 - View
Brassica rapa BraA02t05253Z A02 + View
Brassica rapa BraA05t23191Z A05 - View
Beta vulgaris EL10Ac5g10837 K09391 - transcription factor E2F7/8 (E2F7_8) Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G206.69 PGAv.1.6.scaffold206 + View
Capsicum annuum CAN.G853.21 PGAv.1.6.scaffold853 - View
Cicer arietinum L. Ca_21879_v3 Ca_LG7_v3 + View
Corylus avellana Haze_14616 Similar to E2FE: E2F transcription factor-like E2FE (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_07433 Similar to E2FE: E2F transcription factor-like E2FE (Arabidopsis thaliana OX%3D3702) 4 + View
Citrus clementina Ciclev10020979m.g scaffold_3 + View
Citrus clementina Ciclev10018041m.g scaffold_2 + View
Carpinus fangiana Cfa007481 Cfa03 + View
Cardamine hirsuta CARHR198350 DP-E2F-like 2 Chr6 - View
Cardamine hirsuta CARHR075650 E2F transcription factor-like protein Chr3 + View
Carya illinoinensis CiPaw.12G022800 PTHR12081:SF46 - E2F TRANSCRIPTION FACTOR-LIKE E2FE Chr12 + View
Carya illinoinensis CiPaw.03G033200 KOG2578 - Transcription factor E2F/dimerization partner (TDP)-like proteins Chr03 - View
Carya illinoinensis CiPaw.11G032500 K09391 - transcription factor E2F7/8 (E2F7_8) Chr11 - View
Citrullus lanatus ClCG01G014130 Pentatricopeptide repeat-containing protein, putative CG_Chr01 - View
Citrullus lanatus ClCG06G016660 Transcription factor family protein CG_Chr06 + View
Cucumis melo MELO3C017127.2 E2F transcription factor-like E2FE chr02 + View
Carica papaya Cpa.g.sc14.76 supercontig_14 - View
Chenopodium quinoa AUR62008287 E2FE: E2F transcription factor-like E2FE C_Quinoa_Scaffold_3422 - View
Chenopodium quinoa AUR62031051 E2FE: E2F transcription factor-like E2FE C_Quinoa_Scaffold_2689 - View
Capsella rubella Carub.0006s1312 PTHR12081//PTHR12081:SF46 - TRANSCRIPTION FACTOR E2F // E2F TRANSCRIPTION FACTOR-LIKE E2FE scaffold_6 + View
Capsella rubella Carub.0003s0076 scaffold_3 + View
Capsella rubella Carub.0005s1426 PTHR12081//PTHR12081:SF46 - TRANSCRIPTION FACTOR E2F // E2F TRANSCRIPTION FACTOR-LIKE E2FE scaffold_5 + View
Cucumis sativus L. CsaV3_1G008200 E2F transcription factor-like chr1 + View
Cucumis sativus L. CsaV3_1G001850 E2F transcription factor-like chr1 - View
Daucus carota DCAR_011188 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv33680 GWHABJS00000014 + View
Davidia involucrata Dinv20702 GWHABJS00000006 + View
Davidia involucrata Dinv02659 GWHABJS00000019 - View
Durio zibethinus Duzib187G0571 NW_019167860.1 + View
Durio zibethinus Duzib084G0382 NW_019167827.1 + View
Durio zibethinus Duzib205G0188 NW_019168381.1 + View
Eucalyptus grandis Eucgr.I01881 Chr09 + View
Eucalyptus grandis Eucgr.K02883 Chr11 - View
Erythranthe guttata Migut.H00175 scaffold_8 + View
Eutrema salsugineum Thhalv10021032m.g PTHR12081:SF46 - E2F TRANSCRIPTION FACTOR-LIKE E2FE scaffold_13 - View
Eutrema salsugineum Thhalv10013977m.g K09391 - transcription factor E2F7/8 (E2F7_8) scaffold_2 + View
Fragaria x ananassa FAN13G2014 K09391 - transcription factor E2F7/8 (E2F7_8) Fvb5-2 + View
Fragaria x ananassa FAN18G3284 K09391 - transcription factor E2F7/8 (E2F7_8) Fvb5-1 + View
Fragaria x ananassa FAN08G2438 K09391 - transcription factor E2F7/8 (E2F7_8) Fvb5-3 - View
Fragaria vesca FvH4_5g16330 K09391 - transcription factor E2F7/8 (E2F7_8) Fvb5 + View
Gossypium hirsutum Gohir.A09G024100 K09391 - transcription factor E2F7/8 (E2F7_8) A09 - View
Gossypium hirsutum Gohir.D09G023300 K09391 - transcription factor E2F7/8 (E2F7_8) D09 - View
Glycine max Glyma.04G178300 PTHR12081//PTHR12081:SF46 - TRANSCRIPTION FACTOR E2F // E2F TRANSCRIPTION FACTOR-LIKE E2FE Gm04 + View
Glycine max Glyma.06G186800 K09391 - transcription factor E2F7/8 (E2F7_8) Gm06 - View
Glycine max Glyma.17G093600 K09391 - transcription factor E2F7/8 (E2F7_8) Gm17 - View
Glycine max Glyma.05G033400 K09391 - transcription factor E2F7/8 (E2F7_8) Gm05 + View
Gossypium raimondii Gorai.006G027400 Chr06 - View
Helianthus annuus HanXRQChr17g0547191 Probable DP-E2F-like protein 3 HanXRQChr17 + View
Helianthus annuus HanXRQChr15g0474311 Probable DP-E2F-like 2 HanXRQChr15 - View
Lupinus albus Lalb_Chr12g0201331 PTHR12081:SF46 - E2F TRANSCRIPTION FACTOR-LIKE E2FE Lalb_Chr12 + View
Lupinus albus Lalb_Chr07g0182511 K09391 - transcription factor E2F7/8 (E2F7_8) Lalb_Chr07 + View
Lupinus albus Lalb_Chr13g0297981 K09391 - transcription factor E2F7/8 (E2F7_8) Lalb_Chr13 - View
Lotus japonicus Lj4g0015995 K09391 - transcription factor E2F7/8 (E2F7_8) chr4 + View
Lonicera japonica Lj5A120G54 GWHAAZE00000005 + View
Malus domestica MD06G1181700 DP-E2F-like 1 Chr06 - View
Malus domestica MD14G1187600 DP-E2F-like 1 Chr14 - View
Manihot esculenta Manes.14G070800 Chromosome14 - View
Manihot esculenta Manes.06G100000 Chromosome06 + View
Manihot esculenta Manes.17G119400 Chromosome17 - View
Medicago truncatula Medtr4g106540 E2F transcription factor-E2FE-like protein chr4 - View
Nelumbo nucifera Nn4g22935 chr4 - View
Petunia axillaris Peaxi162Scf00017g02335 E2F transcription factor-like E2FE Peaxi162Scf00017 + View
Petunia axillaris Peaxi162Scf00129g00736 E2F transcription factor-like E2FE Peaxi162Scf00129 - View
Punica granatum PGR142G2233 NC_045128.1 - View
Punica granatum PGR044G1662 NC_045134.1 + View
Prunus persica Prupe.5G180000 K09391 - transcription factor E2F7/8 (E2F7_8) Pp05 - View
Populus trichocarpa Potri.015G070300 K09391 - transcription factor E2F7/8 (E2F7_8) Chr15 + View
Phaseolus vulgaris Phvul.003G196600 K09391 - transcription factor E2F7/8 (E2F7_8) Chr03 + View
Rosa chinensis RcHm_v2.0_Chr7g0179801 RcHm_v2.0_Chr7 - View
Striga asiatica SGA_v2.0_scaffold135G34820 scaffold135 - View
Salvia bowleyana SalBow1G1745 GWHASIU00000001 + View
Salix brachista Sabra12G0053600 GWHAAZH00000012 + View
Simmondsia chinensis Sc04g0002100 GWHAASQ00000004 - View
Sechium edule Sed0017751 LG01 - View
Sechium edule Sed0027046 LG08 - View
Sechium edule Sed0027252 LG08 - View
Solanum lycopersicum Solyc03g113760.3 E2F transcription factor-like E2FE (AHRD V3.3 *** A0A1U8FXH9_CAPAN) SL4.0ch03 + View
Solanum lycopersicum Solyc02g087310.3 E2F transcription factor-like E2FE (AHRD V3.3 *** A0A2G2VFD9_CAPBA) SL4.0ch02 + View
Schrenkiella parvula Sp3g00740 PTHR12081//PTHR12081:SF46 - TRANSCRIPTION FACTOR E2F // E2F TRANSCRIPTION FACTOR-LIKE E2FE ch3-1 + View
Solanum pennellii Sopen03g032810 E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle. | DP-E2F-like 1 (DEL1) | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Transcription factor E2F/dimerisation partner (TDP) , E2F Family | BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 Spenn-ch03 + View
Solanum pennellii Sopen02g032070 Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. | DP-E2F-like protein 3 (DEL3) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Transcription factor E2F/dimerisation partner (TDP) , E2F Family | BEST Arabidopsis thaliana protein match is: DP-E2F-like 2 Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400001296 Repressor, antagonist of e2f-dp complex ST4.03ch02 - View
Trochodendron aralioides TAR629G0456 group0 + View
Trochodendron aralioides TAR374G1282 group12 + View
Theobroma cacao Thecc.03G003600 DP-E2F-like 1 Chromosome_3 - View
Theobroma cacao Thecc.04G066100 Chromosome_4 - View
Tripterygium wilfordii TWI15G0035 NC_052247.1 - View
Tripterygium wilfordii TWI60G1331 NC_052246.1 - View
Tripterygium wilfordii TWI36G1395 NC_052237.1 - View
Vaccinium macrocarpon vmacro19353 Similar to E2FE: E2F transcription factor-like E2FE (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0659 CM024074.1 - View
Vitis vinifera GSVIVG01007832001 chr17 + View
Vitis vinifera GSVIVG01032583001 chr14 - View