Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049274 PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like isoform X1 [Citrus sinensis] Chr13 - View
CSS0041862 PREDICTED: pentatricopeptide repeat-containing protein At5g03800 [Vitis vinifera] Chr4 + View
CSS0017967 PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like isoform X1 [Citrus sinensis] Contig1052 + View
CSS0033191 PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like, partial [Prunus mume] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G8030 LG-5 + View
Aethionema arabicum Aa31LG5G21950 LG-5 - View
Acer truncatum Atru.chr8.1784 chr8 + View
Acer truncatum Atru.chr3.3532 chr3 + View
Actinidia chinensis Actinidia03698 Lachesis_group9 + View
Arabidopsis lyrata AL4G22040 scaffold_4 + View
Avicennia marina MSTRG.21092 ScioBoG_26769_HRSCAF_26899 + View
Avicennia marina MSTRG.18698 ScioBoG_22153_HRSCAF_22259 - View
Amaranthus hybridus Ah.01g003250 Probable glucuronoxylan glucuronosyltransferase F8H (EC 2.4.1.-) (FRA8 homolog) (Protein FRAGILE FIBER 8 homolog) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy1G01123 CHR01 - View
Aquilegia oxysepala Aqoxy2G01707 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1GBZ2D PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.58BRV0 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HRUQ2D PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NPC14S PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT2G28110 Exostosin family protein Homolog to AT5G22940%2C a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells%2C and FRA8 is targeted to Golgi. Mutants have irregular xylem formation%2C reduced cellulose levels and plants are smaller than normal siblings. FRAGILE FIBER 8 (FRA8)%3B CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263)%3B BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC02g10945 ChrC02 - View
Brassica carinata BcaB02g10141 ChrB02 - View
Brassica carinata BcaC04g19753 ChrC04 + View
Brassica carinata BcaC02g11792 ChrC02 + View
Brassica carinata BcaB08g36391 ChrB08 - View
Brassica carinata BcaC02g08207 ChrC02 + View
Brassica carinata BcaC04g19613 ChrC04 + View
Brassica napus A07p18640 A07 - View
Brassica napus A10p18090 A10 - View
Brassica napus C04p23400 C04 + View
Brassica oleracea BolC4t23843H C4 + View
Brassica oleracea BolC4t27252H C4 - View
Brassica rapa BraA10t43884Z A10 - View
Brassica rapa BraA07t29577Z A07 - View
Beta vulgaris EL10Ac9g22652 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr9_EL10_PGA_scaffold8 + View
Beta vulgaris EL10Ac9g21033 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr9_EL10_PGA_scaffold8 + View
Beta vulgaris EL10Ac9g22602 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G546.32 PGAv.1.6.scaffold546 - View
Cicer arietinum L. Ca_19313_v3 Ca_LG6_v3 - View
Corylus avellana Haze_23722 Similar to IRX7: Probable glucuronoxylan glucuronosyltransferase IRX7 (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g10400 Probable glucuronoxylan glucuronosyltransferase IRX7 chr1 + View
Citrus clementina Ciclev10028404m.g scaffold_8 + View
Ceratophyllum demersum CDE06G2557 4 + View
Carpinus fangiana Cfa010297 Cfa04 + View
Carya illinoinensis CiPaw.13G123900 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Chr13 + View
Citrullus lanatus ClCG02G021530 Exostosin family protein CG_Chr02 - View
Cucumis melo MELO3C026947.2 Exostosin family protein chr11 - View
Carica papaya Cpa.g.sc1.13 supercontig_1 + View
Chenopodium quinoa AUR62029184 F8H: Probable glucuronoxylan glucuronosyltransferase F8H C_Quinoa_Scaffold_1846 + View
Capsella rubella Carub.0004s0889 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_6G014290 Exostosin family protein chr6 - View
Daucus carota DCAR_018773 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv35794 GWHABJS00000015 + View
Davidia involucrata Dinv29368 GWHABJS00000007 + View
Davidia involucrata Dinv16208 GWHABJS00000010 + View
Durio zibethinus Duzib168G0401 NW_019168159.1 - View
Durio zibethinus Duzib170G0158 NW_019167871.1 - View
Erigeron canadensis ECA238G0552 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA233G1541 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.J00384 Chr10 - View
Erythranthe guttata Migut.D02286 scaffold_4 - View
Erythranthe guttata Migut.N02563 scaffold_14 + View
Eutrema salsugineum Thhalv10013464m.g PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10017676m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_10 - View
Eutrema salsugineum Thhalv10016649m.g PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED scaffold_10 - View
Fragaria x ananassa FAN21G3026 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Fvb3-2 - View
Fragaria x ananassa FAN16G2206 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Fvb3-3 - View
Fragaria x ananassa FAN25G3645 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Fvb3-1 - View
Fragaria vesca FvH4_3g30840 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Fvb3 + View
Gossypium hirsutum Gohir.D05G107000 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED D05 - View
Gossypium hirsutum Gohir.A05G106900 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED A05 - View
Glycine max Glyma.10G054300 PF13041 - PPR repeat family (PPR_2) Gm10 + View
Glycine max Glyma.03G184300 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Gm03 - View
Glycine max Glyma.13G141400 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm13 + View
Glycine max Glyma.13G322400 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Gm13 + View
Glycine max Glyma.11G193500 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Gm11 + View
Glycine max Glyma.12G178100 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Gm12 - View
Glycine max Glyma.12G080300 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Gm12 - View
Gossypium raimondii Gorai.009G414200 Chr09 + View
Gossypium raimondii Gorai.009G111000 Chr09 - View
Helianthus annuus HanXRQChr01g0019561 Putative exostosin-like HanXRQChr01 - View
Helianthus annuus HanXRQChr11g0346101 Probable pentatricopeptide repeat (PPR) superfamily protein HanXRQChr11 + View
Helianthus annuus HanXRQChr14g0452531 Putative exostosin-like HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0051F.1_g029360 Hma1.2p1_0051F.1 - View
Lupinus albus Lalb_Chr03g0027671 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Lalb_Chr03 - View
Lupinus albus Lalb_Chr24g0394901 PTHR11062//PTHR11062:SF46 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Lalb_Chr24 - View
Lupinus albus Lalb_Chr01g0004571 PTHR11062//PTHR11062:SF46 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Lalb_Chr01 - View
Lotus japonicus Lj3g0009534 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED chr3 - View
Lotus japonicus Lj3g0020211 PTHR11062//PTHR11062:SF46 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED chr3 + View
Lotus japonicus Lj5g0019817 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr5 - View
Lonicera japonica Lj2A1011T27 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_44241 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_2_99340 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_1_64481 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Lsat_1_v8_lg_1 + View
Malus domestica MD03G1125600 Tetratricopeptide repeat (TPR)-like superfamily protein Chr03 - View
Malus domestica MD11G1146800 Exostosin family protein Chr11 - View
Manihot esculenta Manes.04G013800 Chromosome04 + View
Manihot esculenta Manes.11G151600 Chromosome11 - View
Medicago truncatula Medtr2g084245 glucuronoxylan glucuronosyltransferase, putative chr2 - View
Medicago truncatula Medtr4g057500 glycosyltransferase family 47 protein chr4 + View
Nelumbo nucifera Nn2g13801 chr2 + View
Nelumbo nucifera Nn6g35253 chr6 + View
Nelumbo nucifera Nn2g11612 chr2 - View
Nicotiana tabacum Nitab4.5_0000329g0150 Exostosin-like Nitab4.5_0000329 + View
Olea europaea Oeu029886.1 scaffold2495 + View
Punica granatum PGR004G0144 NC_045131.1 + View
Punica granatum PGR119G1950 NC_045132.1 + View
Prunus persica Prupe.6G110800 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Pp06 - View
Papaver somniferum PSO801G0130 NW_020628818.1 + View
Papaver somniferum PSO339G6089 NC_039366.1 - View
Papaver somniferum PSO063G1921 NC_039364.1 - View
Populus trichocarpa Potri.009G006500 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Chr09 + View
Phaseolus vulgaris Phvul.011G085300 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Chr11 - View
Phaseolus vulgaris Phvul.005G130800 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Chr05 + View
Quercus lobata QL01p020116 1 + View
Quercus lobata QL01p015326 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0057051 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim01G0211200 chr01 + View
Salvia bowleyana SalBow3G0812 GWHASIU00000006 + View
Salix brachista Sabra09G0003700 GWHAAZH00000009 + View
Sechium edule Sed0004068 LG05 + View
Sequoiadendron giganteum SEGI_35901 chr7 - View
Solanum lycopersicum Solyc11g066320.2 Exostosin family protein (AHRD V3.3 *** A0A2U1P7C1_ARTAN) SL4.0ch11 + View
Solanum lycopersicum Solyc09g008300.2 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q941_9MAGN) SL4.0ch09 + View
Schrenkiella parvula Sp4g10920 PTHR11062//PTHR11062:SF46 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED ch4-6 - View
Schrenkiella parvula Sp6g22450 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED ch6-6 - View
Solanum pennellii Sopen09g003120 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch09 + View
Solanum pennellii Sopen03g021890 nascent polypeptide-associated complex subunit alpha-like protein 2 (NACA2) | CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Nascent polypeptide-associated complex, alpha subunit , Nascent polypeptide-associated complex NAC | BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein Spenn-ch03 - View
Solanum pennellii Sopen11g026060 Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings. | FRAGILE FIBER 8 (FRA8) | CONTAINS InterPro DOMAIN/s: Exostosin-like | BEST Arabidopsis thaliana protein match is: FRA8 homolog Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400045602 Pentatricopeptide repeat-containing protein ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400000411 Transferase ST4.03ch11 + View
Theobroma cacao Thecc.09G350000 Exostosin family protein Chromosome_9 - View
Theobroma cacao Thecc.05G069000 Tetratricopeptide repeat-like superfamily protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104810878 probable glucuronoxylan glucuronosyltransferase F8H NW_010965304.1 - View
Tripterygium wilfordii TWI79G1056 NC_052238.1 - View
Tripterygium wilfordii TWI31G0771 NC_052233.1 - View
Vigna mungo VMungo1080G0869 CM024079.1 - View
Vigna mungo VMungo1127G1315 CM024076.1 - View
Vitis vinifera GSVIVG01031485001 chr6 - View