Gene: Sopen11g026060
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g026060
- Transcript Identifier Sopen11g026060.1
- Gene Type Coding gene
- Location Spenn-ch11 : 61770879-61772433 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D001247
- #Genes/#Species 448/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g026060.1
Descriptions
- Description Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings. | FRAGILE FIBER 8 (FRA8) | CONTAINS InterPro DOMAIN/s: Exostosin-like | BEST Arabidopsis thaliana protein match is: FRA8 homolog
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006486 | IEA | InterPro | protein glycosylation | |
| GO:0010417 | ISO | PLAZA Integrative Orthology | glucuronoxylan biosynthetic process | AT5G22940 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT2G28110 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016757 | IEA | InterPro | glycosyltransferase activity | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G22940 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.1.2.2 | Cell wall organisation.hemicellulose.xylan.biosynthesis.glucuronosyltransferase activities.glucuronoxylan glucuronosyltransferase (IRX7) |