Gene: Sopen11g026060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g026060
  • Transcript Identifier Sopen11g026060.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61770879-61772433 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g026060.1

Descriptions

  • Description Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings. | FRAGILE FIBER 8 (FRA8) | CONTAINS InterPro DOMAIN/s: Exostosin-like | BEST Arabidopsis thaliana protein match is: FRA8 homolog
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006486
IEA
InterProprotein glycosylation
GO:0010417
ISO
PLAZA Integrative Orthologyglucuronoxylan biosynthetic process AT5G22940
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT2G28110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
IEA
InterProglycosyltransferase activity
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G22940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040911 Exostosin, GT47 domain
IPR004263 Exostosin-like
Mapman id Description
21.2.2.1.2.2 Cell wall organisation.hemicellulose.xylan.biosynthesis.glucuronosyltransferase activities.glucuronoxylan glucuronosyltransferase (IRX7)