Gene: AT2G28110
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G28110
- Transcript Identifier AT2G28110.1
- Gene Type Coding gene
- Location Chr2 : 11978024-11979641 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D001247
- #Genes/#Species 448/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G28110.1
- symbol FRA8
- Alias IRX7,IRREGULAR XYLEM 7
- full_name FRAGILE FIBER 8
- uniprot Q9ZUV3
Descriptions
- Description Exostosin family protein
- Computational description FRAGILE FIBER 8 (FRA8); CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006486 | IEA | Gene Ontology | protein glycosylation | |
| GO:0006486 | IEA | InterPro | protein glycosylation | |
| GO:0071555 | IEA | GOA Database | cell wall organization | |
| GO:0010417 | IMP IBA TAS | Gene Ontology | glucuronoxylan biosynthetic process | 1 2 3 |
| GO:0009834 | IMP | Gene Ontology | plant-type secondary cell wall biogenesis | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
| GO:0016757 | IEA | GOA Database | glycosyltransferase activity | |
| GO:0016757 | IEA | InterPro | glycosyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0015020 | ISS | Gene Ontology | glucuronosyltransferase activity | 5 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | IDA | Gene Ontology | Golgi apparatus | 5 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0000139 | IEA | GOA Database | Golgi membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.1.2.2 | Cell wall organisation.hemicellulose.xylan.biosynthesis.glucuronosyltransferase activities.glucuronoxylan glucuronosyltransferase (IRX7) |