Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0009365 PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like [Vitis vinifera] Contig1286 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G17600 LG-1 - View
Acer truncatum Atru.chr3.1342 chr3 - View
Actinidia chinensis Actinidia28040 Lachesis_group16 + View
Actinidia chinensis Actinidia06537 Lachesis_group16 + View
Arabidopsis lyrata AL4G11950 scaffold_4 + View
Arabidopsis lyrata AL8G41660 scaffold_8 + View
Avicennia marina MSTRG.16602 ScioBoG_19743_HRSCAF_19834 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.W47UXZ 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J66FTP 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT2G22450 riboflavin biosynthesis protein riboflavin biosynthesis protein%2C putative%3B FUNCTIONS IN: 3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity%2C GTP cyclohydrolase II activity%3B INVOLVED IN: riboflavin biosynthetic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926)%2C Riboflavin biosynthesis protein RibA (InterPro:IPR016299)%2C DHBP synthase RibB (InterPro:IPR000422)%2C DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945)%3B BEST Arabidopsis thaliana protein match is: GTP cyclohydrolase II (TAIR:AT5G64300.1)%3B Has 11284 Blast hits to 11282 proteins in 2317 species: Archae - 207%3B Bacteria - 6851%3B Metazoa - 1%3B Fungi - 301%3B Plants - 119%3B Viruses - 0%3B Other Eukaryotes - 3805 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G64300 GTP cyclohydrolase II encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate%2C respectively GTP cyclohydrolase II (GCH)%3B FUNCTIONS IN: 3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity%2C GTP cyclohydrolase II activity%3B INVOLVED IN: riboflavin biosynthetic process%3B LOCATED IN: chloroplast%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926)%2C DHBP synthase RibB (InterPro:IPR000422)%2C DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945)%3B BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein%2C putative (TAIR:AT2G22450.1)%3B Has 11690 Blast hits to 11688 proteins in 2324 species: Archae - 209%3B Bacteria - 6956%3B Metazoa - 1%3B Fungi - 397%3B Plants - 132%3B Viruses - 0%3B Other Eukaryotes - 3995 (source: NCBI BLink). Chr5 + View
Brassica napus A06p30980 A06 + View
Brassica napus C03p61980 C03 - View
Brassica oleracea BolC3t18457H C3 - View
Brassica rapa BraA06t26040Z A06 + View
Beta vulgaris EL10Ac9g21522 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G523.39 PGAv.1.6.scaffold523 - View
Cicer arietinum L. Ca_00148_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_18367_v3 Ca_LG6_v3 + View
Corylus avellana Haze_10570 Similar to RIBA1: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc02_g21160 Riboflavin biosynthesis protein ribBA, chloroplastic chr2 - View
Citrus clementina Ciclev10025787m.g scaffold_7 - View
Ceratophyllum demersum CDE10G0588 8 - View
Carpinus fangiana Cfa005680 Cfa02 + View
Cardamine hirsuta CARHR278230 Riboflavin biosynthesis protein ribBA Chr8 + View
Cardamine hirsuta CARHR113630 3,4-dihydroxy 2-butanone 4-phosphate synthase Chr4 + View
Carya illinoinensis CiPaw.05G032500 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Chr05 - View
Carya illinoinensis CiPaw.06G155800 3.5.4.25//4.1.99.12 - GTP cyclohydrolase II // 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Chr06 + View
Citrullus lanatus ClCG10G009370 3,4-dihydroxy-2-butanone 4-phosphate synthase CG_Chr10 + View
Cucumis melo MELO3C024827.2 bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like chr07 - View
Carica papaya Cpa.g.sc42.25 supercontig_42 - View
Carica papaya Cpa.g.sc55.69 supercontig_55 - View
Chenopodium quinoa AUR62003839 PCMP-H5: Pentatricopeptide repeat-containing protein At4g37170 C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62013165 RIBA1: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic C_Quinoa_Scaffold_1040 + View
Chenopodium quinoa AUR62010165 RIBA1: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic C_Quinoa_Scaffold_1257 + View
Capsella rubella Carub.0004s0161 PTHR21327:SF11 - MONOFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 2, CHLOROPLASTIC scaffold_4 + View
Capsella rubella Carub.0008s2509 3.5.4.25//4.1.99.12 - GTP cyclohydrolase II // 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase scaffold_8 + View
Cucumis sativus L. CsaV3_4G009570 Riboflavin biosynthesis protein ribBA chr4 + View
Daucus carota DCAR_021879 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_001770 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv24168 GWHABJS00000005 - View
Davidia involucrata Dinv09004 GWHABJS00000002 + View
Durio zibethinus Duzib132G1097 NW_019167915.1 - View
Durio zibethinus Duzib248G1074 NW_019168048.1 + View
Erigeron canadensis ECA234G3830 Conyza_canadensis_scaffold:4 + View
Erythranthe guttata Migut.B00579 scaffold_2 - View
Erythranthe guttata Migut.N01084 scaffold_14 + View
Eutrema salsugineum Thhalv10000152m.g 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase scaffold_15 + View
Eutrema salsugineum Thhalv10003958m.g 3.5.4.25//4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase scaffold_6 - View
Gossypium hirsutum Gohir.D02G199200 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase D02 + View
Gossypium hirsutum Gohir.D04G156000 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase D04 + View
Gossypium hirsutum Gohir.A03G175500 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase A03 + View
Gossypium hirsutum Gohir.A04G114600 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase A04 + View
Glycine max Glyma.08G177300 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Gm08 - View
Gossypium raimondii Gorai.012G143000 Chr12 + View
Gossypium raimondii Gorai.005G223700 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0784F.1_g217200 Hma1.2p1_0784F.1 + View
Lupinus albus Lalb_Chr20g0122831 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Lalb_Chr20 + View
Lupinus albus Lalb_Chr05g0217611 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Lalb_Chr05 + View
Lotus japonicus Lj4g0010797 3.5.4.25//4.1.99.12 - GTP cyclohydrolase II // 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase chr4 - View
Lotus japonicus Lj6g0004108 3.5.4.25//4.1.99.12 - GTP cyclohydrolase II // 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase chr6 - View
Lonicera japonica Lj5A234T85 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_9_115140 Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_5_108740 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Lsat_1_v8_lg_5 + View
Magnolia biondii MBI06_g22314_MAGBIO AED:0.11 Chr06 + View
Manihot esculenta Manes.12G129700 Chromosome12 - View
Medicago truncatula Medtr4g094130 3,4-dihydroxy-2-butanone 4-phosphate synthase chr4 - View
Medicago truncatula Medtr2g009270 3,4-dihydroxy-2-butanone 4-phosphate synthase chr2 + View
Nelumbo nucifera Nn5g29995 chr5 - View
Nicotiana tabacum Nitab4.5_0000863g0060 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB, DHBP synthase RibB-like alpha/beta domain, Riboflavin biosynthesis protein RibBA, GTP cyclohydrolase II, RibA Nitab4.5_0000863 - View
Petunia axillaris Peaxi162Scf00299g01141 Riboflavin biosynthesis protein RibBA Peaxi162Scf00299 - View
Punica granatum PGR042G2777 NC_045130.1 + View
Prunus persica Prupe.6G193700 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Pp06 + View
Prunus persica Prupe.8G065300 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Pp08 - View
Pisum sativum Psat1g215720 3 +4-dihydroxy-2-butanone 4-phosphate synthase chr1LG6 - View
Populus trichocarpa Potri.017G050400 PTHR21327:SF9 - BIFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 1, CHLOROPLASTIC Chr17 - View
Populus trichocarpa Potri.001G310500 PTHR21327:SF9 - BIFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 1, CHLOROPLASTIC Chr01 - View
Populus trichocarpa Potri.005G071600 PTHR21327:SF11 - MONOFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 2, CHLOROPLASTIC Chr05 - View
Populus trichocarpa Potri.007G097300 PTHR21327:SF11 - MONOFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 2, CHLOROPLASTIC Chr07 + View
Phaseolus vulgaris Phvul.006G204200 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Chr06 - View
Phaseolus vulgaris Phvul.002G210900 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Chr02 + View
Quercus lobata QL06p048003 6 - View
Quercus lobata QL11p023181 11 + View
Rhododendron simsii Rhsim05G0103300 chr05 - View
Striga asiatica SGA_v2.0_scaffold14G07140 scaffold14 + View
Salvia bowleyana SalBow6G5851 GWHASIU00000002 + View
Salix brachista Sabra16G0196200 GWHAAZH00000016 - View
Salix brachista Sabra05G0058600 GWHAAZH00000005 - View
Salix brachista Sabra17G0042400 GWHAAZH00000017 - View
Salix brachista Sabra17G0037100 GWHAAZH00000017 - View
Simmondsia chinensis Sc08g0003680 GWHAASQ00000008 - View
Sechium edule Sed0008266 LG07 - View
Sechium edule Sed0006439 LG06 + View
Sechium edule Sed0005653 LG13 + View
Solanum lycopersicum Solyc01g105560.3 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase SL4.0ch01 + View
Solanum lycopersicum Solyc11g010300.2 3,4-dihydroxy-2-butanone 4-phosphate synthase (AHRD V3.3 *** A0A147KHG0_9ACTN) SL4.0ch11 + View
Schrenkiella parvula Sp4g01460 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase ch4-1 + View
Schrenkiella parvula Sp2g27360 3.5.4.25//4.1.99.12 - GTP cyclohydrolase II // 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase ch2-4 + View
Solanum pennellii Sopen01g048020 encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively | GTP cyclohydrolase II (GCH) | FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity | INVOLVED IN: riboflavin biosynthetic process | LOCATED IN: chloroplast, membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II , DHBP synthase RibB , DHBP synthase RibB-like alpha/beta domain | BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein, putative Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400016219 GTP cyclohydrolase II ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400012571 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase ST4.03ch01 + View
Selenicereus undatus Hund00076 Scaffold_33678 + View
Trochodendron aralioides TAR381G0921 group11 - View
Theobroma cacao Thecc.02G133600 GTP cyclohydrolase II Chromosome_2 - View
Tarenaya hassleriana THA.LOC104807677 monofunctional riboflavin biosynthesis protein RIBA 2%2C chloroplastic NW_010963495.1 - View
Trifolium pratense TPR.G2833 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI14G0452 NC_052249.1 - View
Vaccinium macrocarpon vmacro19947 Similar to RIBA1: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View