Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016295 PREDICTED: agamous-like MADS-box protein AGL19 [Populus euphratica] Chr14 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8300 LG-3 - View
Acer truncatum Atru.chr9.472 chr9 + View
Acer truncatum Atru.chr5.366 chr5 + View
Arabidopsis lyrata AL8G38970 scaffold_8 + View
Arabidopsis lyrata AL8G26160 scaffold_8 - View
Avicennia marina MSTRG.8779 ScioBoG_11560_HRSCAF_11609 + View
Avicennia marina MSTRG.27149 ScioBoG_8578_HRSCAF_8617 + View
Aquilegia oxysepala Aqoxy7G00494 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.70E6DW PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.509QUQ PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QJDQ9C PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5B6ZAR PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6TKF7G PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT5G51860 K-box region and MADS-box transcription factor family protein Encodes a MADS-box transcription factor involved in floral transition. K-box region and MADS-box transcription factor family protein %3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: embryo%3B EXPRESSED DURING: E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1)%3B Has 6804 Blast hits to 6802 proteins in 884 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 630%3B Fungi - 309%3B Plants - 5790%3B Viruses - 0%3B Other Eukaryotes - 75 (source: NCBI BLink). K-box region and MADS-box transcription factor family protein %3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: embryo%3B EXPRESSED DURING: E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1)%3B Has 6927 Blast hits to 6925 proteins in 893 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 635%3B Fungi - 318%3B Plants - 5897%3B Viruses - 0%3B Other Eukaryotes - 77 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaNung03693 Contig1271 - View
Brassica carinata BcaC03g18129 ChrC03 + View
Brassica carinata BcaB08g35539 ChrB08 - View
Brassica carinata BcaC09g50774 ChrC09 + View
Brassica carinata BcaC01g06141 ChrC01 - View
Brassica napus C09p41350 C09 - View
Brassica napus A01p16710 A01 - View
Brassica napus C07p54340 C07 - View
Brassica napus A03p15990 A03 + View
Brassica napus C02p61960 C02 + View
Brassica napus C01p20980 C01 - View
Brassica oleracea BolC1t02025H C1 - View
Brassica oleracea BolC3t14272H C3 + View
Brassica oleracea BolC9t57010H C9 - View
Brassica oleracea BolC2t12257H C2 + View
Brassica rapa BraA03t14672Z A03 - View
Brassica rapa BraA10t43050Z A10 - View
Brassica rapa BraA03t10890Z A03 + View
Cicer arietinum L. Ca_10815_v3 Ca_LG4_v3 - View
Coffea canephora Cc02_g03570 MADS-box protein SOC1 chr2 + View
Coffea canephora Cc02_g36980 MADS-box transcription factor 6 chr2 + View
Citrus clementina Ciclev10022568m.g scaffold_3 + View
Citrus clementina Ciclev10022936m.g scaffold_3 - View
Citrus clementina Ciclev10006217m.g scaffold_9 - View
Carpinus fangiana Cfa012077 Cfa05 - View
Carpinus fangiana Cfa008256 Cfa03 + View
Cardamine hirsuta CARHR140870 MADS-box transcription factor Chr4 + View
Carya illinoinensis CiPaw.03G099900 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Chr03 + View
Carya illinoinensis CiPaw.04G069000 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Chr04 + View
Carya illinoinensis CiPaw.02G164800 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr02 + View
Citrullus lanatus ClCG05G007650 MADS box transcription factor 7 CG_Chr05 - View
Citrullus lanatus ClCG01G005350 MADS-box transcription factor 2 CG_Chr01 - View
Cucumis melo MELO3C031794.2 MADS-box transcription factor 17-like chr06 + View
Capsella rubella Carub.0008s2284 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 scaffold_8 + View
Capsella rubella Carub.0004s2830 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED scaffold_4 + View
Capsella rubella Carub.0008s1190 PTHR11945//PTHR11945:SF204 - MADS BOX PROTEIN // F21D18.12-RELATED scaffold_8 - View
Capsella rubella Carub.0007s1557 PTHR11945//PTHR11945:SF204 - MADS BOX PROTEIN // F21D18.12-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_3G016620 MADS-box transcription factor 17-like chr3 + View
Daucus carota DCAR_006890 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv43739 GWHABJS00000016 + View
Durio zibethinus Duzib133G1353 NW_019167938.1 + View
Durio zibethinus Duzib068G0408 NW_019167838.1 + View
Durio zibethinus Duzib084G0633 NW_019167827.1 + View
Durio zibethinus Duzib205G1680 NW_019168381.1 + View
Durio zibethinus Duzib138G0083 NW_019167893.1 + View
Erigeron canadensis ECA232G1657 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.K00190 Chr11 - View
Eucalyptus grandis Eucgr.A02846 Chr01 + View
Erythranthe guttata Migut.F01157 scaffold_6 + View
Erythranthe guttata Migut.B01667 scaffold_2 + View
Eutrema salsugineum Thhalv10026205m.g PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 scaffold_1 + View
Eutrema salsugineum Thhalv10001597m.g PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED scaffold_22 + View
Eutrema salsugineum Thhalv10015303m.g PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 scaffold_2 + View
Fragaria x ananassa FAN10G1629 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Fvb7-1 + View
Fragaria x ananassa FAN06G1443 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Fvb7-2 - View
Fragaria x ananassa FAN03G2293 PTHR11945//PTHR11945:SF208 - MADS BOX PROTEIN // MADS-BOX PROTEIN SOC1 Fvb7-3 + View
Fragaria x ananassa FAN01G1796 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Fvb7-4 + View
Fragaria x ananassa FAN06G3751 PTHR11945//PTHR11945:SF208 - MADS BOX PROTEIN // MADS-BOX PROTEIN SOC1 Fvb7-2 - View
Fragaria x ananassa FAN03G1661 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Fvb7-3 + View
Fragaria vesca FvH4_7g28690 PTHR11945//PTHR11945:SF146 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Fvb7 + View
Gossypium hirsutum Gohir.D11G087700 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED D11 + View
Gossypium hirsutum Gohir.A09G038700 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED A09 - View
Gossypium hirsutum Gohir.A11G083600 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED A11 + View
Glycine max Glyma.16G200700 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm16 - View
Glycine max Glyma.09G149000 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm09 - View
Glycine max Glyma.20G153700 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm20 + View
Glycine max Glyma.10G240500 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Gm10 + View
Gossypium raimondii Gorai.007G093700 Chr07 + View
Lupinus albus Lalb_Chr19g0131171 PF00319 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) Lalb_Chr19 - View
Lupinus albus Lalb_Chr02g0140891 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Lalb_Chr02 - View
Lupinus albus Lalb_Chr06g0160871 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr06 + View
Lotus japonicus Lj5g0014542 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED chr5 + View
Lotus japonicus Lj2g0024634 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED chr2 - View
Lonicera japonica Lj1A988T30 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_8_7760 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Lsat_1_v8_lg_8 + View
Malus domestica MD01G1192400 AGAMOUS-like 6 Chr01 + View
Manihot esculenta Manes.06G141600 Chromosome06 - View
Manihot esculenta Manes.01G263500 Chromosome01 + View
Manihot esculenta Manes.05G041900 Chromosome05 + View
Medicago truncatula Medtr1g101970 MADS-box transcription factor chr1 - View
Olea europaea Oeu022534.1 chr1 - View
Punica granatum PGR142G3692 NC_045128.1 + View
Prunus persica Prupe.2G287000 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Pp02 + View
Prunus persica Prupe.2G151000 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Pp02 + View
Pisum sativum Psat6g201800 K-box region chr6LG2 - View
Papaver somniferum PSO782G4975 NC_039365.1 + View
Populus trichocarpa Potri.012G132600 PTHR11945//PTHR11945:SF206 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr12 + View
Populus trichocarpa Potri.014G074100 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Chr14 + View
Populus trichocarpa Potri.015G134800 PTHR11945//PTHR11945:SF206 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr15 + View
Phaseolus vulgaris Phvul.004G123500 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr04 - View
Phaseolus vulgaris Phvul.007G065100 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr07 + View
Rosa chinensis RcHm_v2.0_Chr1g0376191 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0174500 chr03 + View
Striga asiatica SGA_v2.0_scaffold10G05408 scaffold10 + View
Salix brachista Sabra15G0147200 GWHAAZH00000015 - View
Simmondsia chinensis Sc13g0008240 GWHAASQ00000013 - View
Sechium edule Sed0024599 LG13 + View
Schrenkiella parvula Sp7g23460 PTHR11945//PTHR11945:SF208 - MADS BOX PROTEIN // MADS-BOX PROTEIN SOC1 ch7-4 - View
Schrenkiella parvula Sp4g27690 PTHR11945//PTHR11945:SF146 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED ch4-6 + View
Schrenkiella parvula Sp6g14110 PTHR11945//PTHR11945:SF208 - MADS BOX PROTEIN // MADS-BOX PROTEIN SOC1 ch6-6 - View
Solanum tuberosum PGSC0003DMG400025279 MADS-box transcription factor FBP22 ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG402024252 MADS-box transcription factor FBP22 ST4.03ch03 - View
Trochodendron aralioides TAR636G2894 group1 + View
Theobroma cacao Thecc.01G371300 AGAMOUS-like 20 Chromosome_1 + View
Theobroma cacao Thecc.03G166600 AGAMOUS-like 6 Chromosome_3 + View
Tarenaya hassleriana THA.LOC104825084 MADS-box protein AGL72-like NW_010966986.1 - View
Tarenaya hassleriana THA.LOC104811491 MADS-box protein AGL71-like NW_010965372.1 + View
Tripterygium wilfordii TWI39G0186 NC_052250.1 + View
Tripterygium wilfordii TWI59G0565 NC_052248.1 + View
Tripterygium wilfordii TWI14G1188 NC_052249.1 - View
Vigna mungo VMungo0464G0940 CM024077.1 - View
Vigna mungo VMungo0720G0519 CM024071.1 + View
Vigna mungo VMungo0251G0256 CM024069.1 - View
Vitis vinifera GSVIVG01018450001 chr16 + View