Gene: Carub.0008s2284

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2284
  • Transcript Identifier Carub.0008s2284.1
  • Gene Type Coding gene
  • Location scaffold_8 : 11256687-11260348 : positive

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2284.v1.1
  • pacid 39252952
  • synonym Carubv10027142m.g

Descriptions

  • Description PTHR11945:SF208 - MADS-BOX PROTEIN SOC1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009838
ISO
PLAZA Integrative Orthologyabscission AT5G62165
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT5G62165
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G62165
GO:0080187
ISO
PLAZA Integrative Orthologyfloral organ senescence AT5G62165

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G62165

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002100 Transcription factor, MADS-box
IPR033896 MADS MEF2-like
IPR036879 Transcription factor, MADS-box superfamily
IPR002487 Transcription factor, K-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)