Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0040446 hypothetical protein AALP_AA3G371100 [Arabis alpina] Chr13 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.1778 chr5 - View
Actinidia chinensis Actinidia09529 Lachesis_group15 - View
Actinidia chinensis Actinidia30141 Lachesis_group24 - View
Arabidopsis lyrata AL3G53400 scaffold_3 + View
Avicennia marina MSTRG.18338 ScioBoG_22153_HRSCAF_22259 - View
Avicennia marina MSTRG.21476 ScioBoG_26769_HRSCAF_26899 + View
Aquilegia oxysepala Aqoxy2G03706 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZVPG3A K01900 - succinyl-CoA synthetase beta subunit (LSC2) arahy.Tifrunner.gnm1.Arahy.02 - View
Arabidopsis thaliana AT2G20420 ATP citrate lyase (ACL) family protein ATP citrate lyase (ACL) family protein%3B FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity%2C copper ion binding%2C ATP binding%3B INVOLVED IN: response to cadmium ion%2C metabolic process%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 16 growth stages%3B CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase%2C beta subunit (InterPro:IPR005809)%2C Succinyl-CoA synthetase%2C beta subunit%2C conserved site (InterPro:IPR017866)%2C ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811)%2C ATP-grasp fold (InterPro:IPR011761)%2C ATP-grasp fold%2C subdomain 2 (InterPro:IPR013816)%2C ATP-grasp fold%2C succinyl-CoA synthetase-type (InterPro:IPR013650)%2C Succinyl-CoA synthetase-like (InterPro:IPR016102)%3B BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4)%3B Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181%3B Bacteria - 4147%3B Metazoa - 466%3B Fungi - 228%3B Plants - 81%3B Viruses - 0%3B Other Eukaryotes - 4234 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0736G150 AmTr_v1.0_scaffold00067 + View
Brassica carinata BcaB03g16833 ChrB03 + View
Brassica carinata BcaC06g36729 ChrC06 + View
Brassica carinata BcaB08g34906 ChrB08 + View
Brassica napus C07p00650 C07 - View
Brassica napus A07p00310 A07 - View
Brassica oleracea BolC7t40509H C7 - View
Brassica rapa BraA07t27822Z A07 - View
Capsicum annuum CAN.G771.36 PGAv.1.6.scaffold771 - View
Cannabis sativa CANSAT01G1551 NC_044373.1 + View
Cicer arietinum L. Ca_09660_v3 Ca_LG4_v3 + View
Corylus avellana Haze_24666 Similar to At2g20420: Succinate--CoA ligase subunit beta, mitochondrial (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc01_g18040 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial chr1 + View
Citrus clementina Ciclev10020300m.g scaffold_3 + View
Cardamine hirsuta CARHR110970 Succinyl-CoA ligase subunit beta Chr3 + View
Carya illinoinensis CiPaw.03G267900 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Chr03 - View
Carya illinoinensis CiPaw.04G188500 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Chr04 - View
Citrullus lanatus ClCG06G001530 Succinyl-CoA ligase [ADP-forming] subunit beta CG_Chr06 + View
Cucumis melo MELO3C022382.2 Succinate--CoA ligase subunit beta, mitochondrial Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial chr11 - View
Carica papaya Cpa.g.sc165.34 supercontig_165 - View
Capsella rubella Carub.0003s3481 K01900 - succinyl-CoA synthetase beta subunit (LSC2) scaffold_3 + View
Cucumis sativus L. CsaV3_6G007490 Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial chr6 + View
Daucus carota DCAR_018503 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv16374 GWHABJS00000007 - View
Davidia involucrata Dinv34652 GWHABJS00000010 + View
Durio zibethinus Duzib211G0126 NW_019168049.1 - View
Durio zibethinus Duzib138G0603 NW_019167893.1 - View
Erigeron canadensis ECA236G0129 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.H00143 Chr08 + View
Erythranthe guttata Migut.N02218 scaffold_14 - View
Erythranthe guttata Migut.D00454 scaffold_4 - View
Eutrema salsugineum Thhalv10001996m.g K01900 - succinyl-CoA synthetase beta subunit (LSC2) scaffold_12 + View
Fragaria x ananassa FAN27G2583 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Fvb2-1 + View
Fragaria x ananassa FAN24G2352 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Fvb2-2 - View
Fragaria x ananassa FAN20G1240 PTHR11815:SF1 - SUCCINYL-COA LIGASE [ADP-FORMING] SUBUNIT BETA, MITOCHONDRIAL Fvb2-3 - View
Fragaria x ananassa FAN15G2391 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Fvb2-4 + View
Fragaria vesca FvH4_2g20990 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Fvb2 + View
Gossypium hirsutum Gohir.A07G150500 K01900 - succinyl-CoA synthetase beta subunit (LSC2) A07 - View
Gossypium hirsutum Gohir.D07G156900 K01900 - succinyl-CoA synthetase beta subunit (LSC2) D07 - View
Glycine max Glyma.10G039000 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Gm10 - View
Glycine max Glyma.13G125400 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Gm13 - View
Gossypium raimondii Gorai.001G179900 Chr01 - View
Helianthus annuus HanXRQChr10g0280751 Probable succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial HanXRQChr10 + View
Hydrangea macrophylla Hma1.2p1_0273F.1_g109400 Hma1.2p1_0273F.1 + View
Lupinus albus Lalb_Chr21g0314011 6.2.1.5 - Succinate--CoA ligase (ADP-forming) / Succinyl-CoA synthetase (ADP-forming) Lalb_Chr21 - View
Lupinus albus Lalb_Chr06g0170611 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Lalb_Chr06 - View
Lupinus albus Lalb_Chr02g0152651 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Lalb_Chr02 - View
Lotus japonicus Lj5g0009759 K01900 - succinyl-CoA synthetase beta subunit (LSC2) chr5 + View
Lonicera japonica Lj1A71T65 GWHAAZE00000001 - View
Lonicera japonica Lj2A1145G31 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_9_10741 Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_8_92300 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Lsat_1_v8_lg_8 + View
Magnolia biondii MBI10_g27857_MAGBIO AED:0.43 Chr10 + View
Magnolia biondii MBI07_g32831_MAGBIO AED:0.10 Chr07 + View
Malus domestica MD10G1179600 ATP citrate lyase (ACL) family protein Chr10 + View
Malus domestica MD05G1193100 ATP citrate lyase (ACL) family protein Chr05 + View
Manihot esculenta Manes.12G034800 Chromosome12 - View
Manihot esculenta Manes.13G037000 Chromosome13 - View
Medicago truncatula Medtr1g069645 succinyl-CoA ligase [ADP-forming] subunit beta chr1 + View
Nelumbo nucifera Nn1g02862 chr1 + View
Nelumbo nucifera Nn3g19723 chr3 - View
Nicotiana tabacum Nitab4.5_0001919g0010 ATP-grasp fold, ATP-citrate lyase/succinyl-CoA ligase, ATP-grasp fold, subdomain 2, Succinyl-CoA synthetase, beta subunit, ATP-grasp fold, succinyl-CoA synthetase-type, Succinyl-CoA synthetase-like, ATP-grasp fold, subdomain 1, Succinyl-CoA synthetase, beta subunit, conserved site Nitab4.5_0001919 + View
Nicotiana tabacum Nitab4.5_0003295g0070 ATP-grasp fold, subdomain 2, Succinyl-CoA synthetase-like, Succinyl-CoA synthetase, beta subunit, ATP-grasp fold, succinyl-CoA synthetase-type, ATP-grasp fold, ATP-citrate lyase/succinyl-CoA ligase, Succinyl-CoA synthetase, beta subunit, conserved site, ATP-grasp fold, subdomain 1 Nitab4.5_0003295 - View
Oryza sativa ssp. japonica Os02g0621700 Similar to Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta). chr02 + View
Petunia axillaris Peaxi162Scf00013g01239 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial Peaxi162Scf00013 - View
Petunia axillaris Peaxi162Scf00415g00213 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial Peaxi162Scf00415 - View
Prunus persica Prupe.8G219400 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Pp08 - View
Papaver somniferum PSO210G2341 NC_039359.1 + View
Populus trichocarpa Potri.002G259600 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Chr02 + View
Populus trichocarpa Potri.014G195700 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Chr14 + View
Phaseolus vulgaris Phvul.007G190800 K01900 - succinyl-CoA synthetase beta subunit (LSC2) Chr07 + View
Quercus lobata QL09p040223 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0287371 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim01G0261700 chr01 + View
Rhododendron simsii Rhsim13G0038000 chr13 - View
Striga asiatica SGA_v2.0_scaffold138G35202 scaffold138 + View
Salvia bowleyana SalBow4G2771 GWHASIU00000008 + View
Salvia bowleyana SalBow6G2566 GWHASIU00000002 + View
Salix brachista Sabra02G0197500 GWHAAZH00000002 + View
Salix brachista Sabra14G0145900 GWHAAZH00000014 - View
Sechium edule Sed0026875 LG09 - View
Sechium edule Sed0019801 LG07 - View
Solanum lycopersicum Solyc06g083790.3 succinyl CoA ligase beta subunit SL4.0ch06 + View
Schrenkiella parvula Sp3g33640 K01900 - succinyl-CoA synthetase beta subunit (LSC2) ch3-6 + View
Solanum pennellii Sopen06g035200 ATP citrate lyase (ACL) family protein | FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding | INVOLVED IN: response to cadmium ion, metabolic process | LOCATED IN: mitochondrion | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit , Succinyl-CoA synthetase, beta subunit, conserved site , ATP-citrate lyase/succinyl-CoA ligase , ATP-grasp fold , ATP-grasp fold, subdomain 2 , ATP-grasp fold, succinyl-CoA synthetase-type , Succinyl-CoA synthetase-like | BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400020149 Succinyl CoA ligase beta subunit ST4.03ch06 + View
Trochodendron aralioides TAR636G3081 group1 + View
Trochodendron aralioides TAR365G0842 group16 + View
Theobroma cacao Thecc.01G253900 ATP citrate lyase (ACL) family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104804042 succinate--CoA ligase [ADP-forming] subunit beta%2C mitochondrial NW_010971389.1 + View
Tripterygium wilfordii TWI18G0319 NC_052241.1 + View
Tripterygium wilfordii TWI12G1332 NC_052243.1 + View
Vaccinium macrocarpon vmacro14809 Similar to Os02g0621700: Succinate--CoA ligase subunit beta, mitochondrial (Oryza sativa subsp. japonica OX%3D39947) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02694 Similar to At2g20420: Succinate--CoA ligase subunit beta, mitochondrial (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0501 CM024071.1 - View
Vanilla planifolia HPP92_008549 Succinate--CoA ligase subunit beta, mitochondrial *** CM028153.1 + View
Vitis vinifera GSVIVG01028373001 chr7 - View
Zea mays Zm00001eb185030 Zm00001e023009 Succinate-CoA ligase subunit beta Succinate--CoA ligase [ADP-forming] subunit beta mitochondrial 4 + View