Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0040381 PREDICTED: transcription factor UNE12-like isoform X2 [Vitis vinifera] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G13830 LG-3 - View
Actinidia chinensis Actinidia38336 Lachesis_group15 + View
Arabidopsis lyrata AL7G21100 scaffold_7 + View
Arabidopsis lyrata AL8G34110 scaffold_8 - View
Aquilegia oxysepala Aqoxy7G03445 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9RJJ4S PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT4G30980 LJRHL1-like 2 Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1)%2C At4g30980 (AtLRL2)%2C and At5g58010 (AtLRL3). LJRHL1-like 2 (LRL2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: root hair cell development%2C regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: LJRHL1-like 1 (TAIR:AT2G24260.1)%3B Has 3371 Blast hits to 3365 proteins in 149 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 112%3B Fungi - 43%3B Plants - 3213%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT5G58010 LJRHL1-like 3 Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1)%2C At4g30980 (AtLRL2)%2C and At5g58010 (AtLRL3). LJRHL1-like 3 (LRL3)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: LJRHL1-like 1 (TAIR:AT2G24260.1)%3B Has 3430 Blast hits to 3424 proteins in 205 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 226%3B Fungi - 49%3B Plants - 3153%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G24260 LJRHL1-like 1 Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1)%2C At4g30980 (AtLRL2)%2C and At5g58010 (AtLRL3). LJRHL1-like 1 (LRL1)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: root hair cell development%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 (TAIR:AT4G30980.1)%3B Has 3384 Blast hits to 3378 proteins in 167 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 150%3B Fungi - 13%3B Plants - 3219%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0739G086 AmTr_v1.0_scaffold00065 + View
Brassica carinata BcaB05g22393 ChrB05 - View
Brassica carinata BcaC01g01122 ChrC01 + View
Brassica carinata BcaC09g51886 ChrC09 - View
Brassica carinata BcaC04g19917 ChrC04 + View
Brassica napus C01p07960 C01 + View
Brassica napus C09p49870 C09 - View
Brassica napus A10p16160 A10 + View
Brassica napus C03p88350 C03 + View
Brassica oleracea BolC9t57835H C9 - View
Brassica oleracea BolC1t00783H C1 + View
Brassica oleracea BolC2t07488H C2 + View
Brassica rapa BraA10t43613Z A10 - View
Brassica rapa BraA02t05878Z A02 + View
Brassica rapa BraA01t00671Z A01 + View
Capsicum annuum CAN.G551.34 PGAv.1.6.scaffold551 + View
Cannabis sativa CANSAT11G0995 NC_044377.1 - View
Cicer arietinum L. Ca_21115_v3 Ca_LG7_v3 + View
Corylus avellana Haze_19228 Similar to BHLH66: Transcription factor bHLH66 (Arabidopsis thaliana OX%3D3702) 7 - View
Coffea canephora Cc06_g15180 Transcription factor bHLH66 chr6 - View
Citrus clementina Ciclev10008192m.g scaffold_1 - View
Carpinus fangiana Cfa020843 Cfa08 - View
Cardamine hirsuta CARHR238870 Transcription factor Chr7 - View
Cardamine hirsuta CARHR271820 Transcription factor Chr8 - View
Carya illinoinensis CiPaw.16G114500 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED Chr16 + View
Carya illinoinensis CiPaw.15G174800 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED Chr15 - View
Citrullus lanatus ClCG06G012270 BHLH transcription factor CG_Chr06 + View
Cucumis melo MELO3C010237.2 transcription factor bHLH82 chr02 - View
Capsella rubella Carub.0008s1856 PF00010 - Helix-loop-helix DNA-binding domain (HLH) scaffold_8 - View
Capsella rubella Carub.0001s0217 PTHR16223//PTHR16223:SF15 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR UNE12-RELATED scaffold_1 - View
Capsella rubella Carub.0007s0956 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED scaffold_7 + View
Capsella rubella Carub.0004s0359 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_1G028780 transcription factor bHLH82 chr1 + View
Daucus carota DCAR_019383 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv41392 GWHABJS00000013 - View
Davidia involucrata Dinv43226 GWHABJS00000085 + View
Davidia involucrata Dinv42874 GWHABJS00000085 - View
Durio zibethinus Duzib150G1390 NW_019167882.1 - View
Durio zibethinus Duzib187G0388 NW_019167860.1 + View
Durio zibethinus Duzib168G2379 NW_019168159.1 - View
Eucalyptus grandis Eucgr.C02592 Chr03 - View
Eucalyptus grandis Eucgr.C00360 Chr03 - View
Eutrema salsugineum Thhalv10014212m.g PF00010 - Helix-loop-helix DNA-binding domain (HLH) scaffold_2 + View
Fragaria x ananassa FAN28G0090 PTHR16223:SF28 - TRANSCRIPTION FACTOR BHLH66-RELATED Fvb1-1 + View
Fragaria x ananassa FAN26G0839 PTHR16223:SF28 - TRANSCRIPTION FACTOR BHLH66-RELATED Fvb1-2 + View
Fragaria x ananassa FAN23G2443 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED Fvb1-3 - View
Fragaria x ananassa FAN19G1289 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED Fvb1-4 + View
Fragaria vesca FvH4_1g01110 PTHR16223:SF28 - TRANSCRIPTION FACTOR BHLH66-RELATED Fvb1 - View
Gossypium hirsutum Gohir.D06G097200 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED D06 + View
Gossypium hirsutum Gohir.A05G051900 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED A05 + View
Gossypium hirsutum Gohir.D05G053400 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED D05 + View
Glycine max Glyma.15G203900 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED Gm15 + View
Glycine max Glyma.17G075200 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED Gm17 - View
Gossypium raimondii Gorai.009G055200 Chr09 + View
Hydrangea macrophylla Hma1.2p1_0222F.1_g093370 Hma1.2p1_0222F.1 + View
Hydrangea macrophylla Hma1.2p1_0028F.1_g017410 Hma1.2p1_0028F.1 + View
Lupinus albus Lalb_Chr07g0179781 PTHR16223:SF28 - TRANSCRIPTION FACTOR BHLH66-RELATED Lalb_Chr07 + View
Lupinus albus Lalb_Chr08g0234031 PTHR16223:SF28 - TRANSCRIPTION FACTOR BHLH66-RELATED Lalb_Chr08 + View
Lotus japonicus Lj6g0027487 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED chr6 - View
Lonicera japonica Lj7A456T19 GWHAAZE00000007 + View
Lonicera japonica Lj9A715T26 GWHAAZE00000009 + View
Malus domestica MD02G1009200 LJRHL1-like 1 Chr02 - View
Malus domestica MD15G1154600 LJRHL1-like 1 Chr15 - View
Medicago truncatula Medtr4g131160 BHLH transcription factor chr4 - View
Nelumbo nucifera Nn2g12329 chr2 + View
Nelumbo nucifera Nn8g39838 chr8 + View
Nicotiana tabacum Nitab4.5_0001478g0050 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0001478 - View
Nicotiana tabacum Nitab4.5_0002315g0100 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0002315 + View
Olea europaea Oeu050488.1 scaffold568 + View
Olea europaea Oeu021260.2 chr11 + View
Oryza sativa ssp. japonica Os06g0193400 Similar to BHLH transcription factor. Similar to Helix-loop-helix protein homolog. chr06 - View
Petunia axillaris Peaxi162Scf00347g01020 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00347 + View
Punica granatum PGR142G0757 NC_045128.1 + View
Prunus persica Prupe.7G260800 PTHR16223:SF28 - TRANSCRIPTION FACTOR BHLH66-RELATED Pp07 + View
Populus trichocarpa Potri.006G186600 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED Chr06 - View
Populus trichocarpa Potri.018G109500 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED Chr18 - View
Phaseolus vulgaris Phvul.003G157100 Chr03 - View
Quercus lobata QL02p092804 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0085911 RcHm_v2.0_Chr2 - View
Striga asiatica SGA_v2.0_scaffold45G17039 scaffold45 + View
Salvia bowleyana SalBow1G8475 GWHASIU00000001 + View
Salix brachista Sabra18G0092400 GWHAAZH00000018 - View
Salix brachista Sabra06G0141700 GWHAAZH00000006 - View
Sechium edule Sed0000198 LG08 - View
Sechium edule Sed0012092 LG12 - View
Solanum lycopersicum Solyc07g005400.3 bHLH transcription factor 050 SL4.0ch07 + View
Solanum lycopersicum Solyc12g010170.2 bHLH transcription factor 070 SL4.0ch12 - View
Schrenkiella parvula Sp6g19690 PF00010 - Helix-loop-helix DNA-binding domain (HLH) ch6-6 - View
Schrenkiella parvula Sp7g28850 PTHR16223//PTHR16223:SF28 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH66-RELATED ch7-5 - View
Solanum pennellii Sopen12g005040 Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3). | LJRHL1-like 1 (LRL1) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: root hair cell development, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 Spenn-ch12 - View
Solanum pennellii Sopen07g001380 Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3). | LJRHL1-like 1 (LRL1) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: root hair cell development, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: LJRHL1-like 2 Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400011133 Joka8 ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400007827 Roothairless1/slippery ST4.03ch12 + View
Trochodendron aralioides TAR625G0948 group4 - View
Theobroma cacao Thecc.09G033000 LJRHL1-like 1 Chromosome_9 - View
Tripterygium wilfordii TWI34G0886 NC_052235.1 - View
Vaccinium macrocarpon vmacro06087 Similar to BHLH66: Transcription factor bHLH66 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3012 CM024074.1 + View
Vitis vinifera GSVIVG01023585001 chr11 - View