Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG3G14900 | LG-3 | + | View | |
| Acer truncatum | Atru.chr3.2765 | chr3 | - | View | |
| Actinidia chinensis | Actinidia06959 | Lachesis_group13 | + | View | |
| Actinidia chinensis | Actinidia16377 | Lachesis_group24 | + | View | |
| Arabidopsis lyrata | AL6G23130 | scaffold_6 | - | View | |
| Avicennia marina | MSTRG.18458 | ScioBoG_22153_HRSCAF_22259 | + | View | |
| Amaranthus hybridus | Ah.06g194520 | Protein LATERAL ROOT PRIMORDIUM 1 | AmaHy_arrow1_Scaffold_6 | + | View |
| Aquilegia oxysepala | Aqoxy2G00374 | CHR02 | + | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.0RI6JJ | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | arahy.Tifrunner.gnm1.Arahy.07 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.H1I1DS | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | arahy.Tifrunner.gnm1.Arahy.17 | + | View |
| Arabidopsis thaliana | AT5G12330 | Lateral root primordium (LRP) protein-like protein A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence%2C many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium%2C stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation. LATERAL ROOT PRIMORDIUM 1 (LRP1)%3B FUNCTIONS IN: protein homodimerization activity%3B INVOLVED IN: response to auxin stimulus%2C root development%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1%2C C-terminal (InterPro:IPR006511)%2C Zinc finger%2C Lateral Root Primordium type 1 (InterPro:IPR006510)%2C Protein of unknown function DUF702 (InterPro:IPR007818)%3B BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr5 | - | View |
| Brassica napus | A10p25490 | A10 | + | View | |
| Brassica napus | C09p64570 | C09 | + | View | |
| Brassica oleracea | BolC9t59290H | C9 | + | View | |
| Brassica rapa | BraA10t44613Z | A10 | + | View | |
| Beta vulgaris | EL10Ac4g10149 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Chr4_EL10_PGA_scaffold1 | - | View |
| Corylus avellana | Haze_23223 | Similar to LRP1: Protein LATERAL ROOT PRIMORDIUM 1 (Arabidopsis thaliana OX%3D3702) | 6 | + | View |
| Citrus clementina | Ciclev10015674m.g | scaffold_2 | + | View | |
| Cardamine hirsuta | CARHR200780 | Lateral root primordium (LRP) protein-related | Chr6 | + | View |
| Carya illinoinensis | CiPaw.14G113700 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Chr14 | - | View |
| Carya illinoinensis | CiPaw.13G151400 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Chr13 | - | View |
| Citrullus lanatus | ClCG03G012640 | LATERAL ROOT PRIMORDIUM 1 family protein | CG_Chr03 | - | View |
| Citrullus lanatus | ClCG02G022900 | Lateral root primordium (LRP) protein-related LENGTH=407 | CG_Chr02 | - | View |
| Chenopodium quinoa | AUR62006536 | LRP1: Protein LATERAL ROOT PRIMORDIUM 1 | C_Quinoa_Scaffold_3429 | + | View |
| Chenopodium quinoa | AUR62000185 | LRP1: Protein LATERAL ROOT PRIMORDIUM 1 | C_Quinoa_Scaffold_2088 | + | View |
| Capsella rubella | Carub.0006s1084 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | scaffold_6 | - | View |
| Cucumis sativus L. | CsaV3_1G043360 | protein LATERAL ROOT PRIMORDIUM 1 | chr1 | + | View |
| Davidia involucrata | Dinv36173 | GWHABJS00000007 | - | View | |
| Durio zibethinus | Duzib150G1376 | NW_019167882.1 | + | View | |
| Durio zibethinus | Duzib170G0005 | NW_019167871.1 | - | View | |
| Erythranthe guttata | Migut.D00656 | scaffold_4 | + | View | |
| Eutrema salsugineum | Thhalv10014142m.g | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | scaffold_2 | - | View |
| Fragaria vesca | FvH4_3g27920 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Fvb3 | - | View |
| Gossypium hirsutum | Gohir.A05G071300 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | A05 | - | View |
| Gossypium hirsutum | Gohir.D07G124300 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | D07 | - | View |
| Gossypium hirsutum | Gohir.A07G120100 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | A07 | - | View |
| Gossypium hirsutum | Gohir.D05G074200 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | D05 | - | View |
| Glycine max | Glyma.02G280000 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Gm02 | - | View |
| Glycine max | Glyma.20G037100 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Gm20 | + | View |
| Glycine max | Glyma.14G034800 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Gm14 | + | View |
| Gossypium raimondii | Gorai.001G134100 | Chr01 | - | View | |
| Gossypium raimondii | Gorai.009G075300 | Chr09 | - | View | |
| Lupinus albus | Lalb_Chr17g0347951 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Lalb_Chr17 | - | View |
| Lupinus albus | Lalb_Chr10g0106301 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Lalb_Chr10 | - | View |
| Lotus japonicus | Lj6g0016073 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | chr6 | + | View |
| Lonicera japonica | Lj1C285T9 | GWHAAZE00000001 | - | View | |
| Malus domestica | MD03G1166900 | Lateral root primordium (LRP) protein-related | Chr03 | + | View |
| Manihot esculenta | Manes.02G140000 | Chromosome02 | + | View | |
| Medicago truncatula | Medtr5g089750 | lateral root primordium (LRP)-like protein | chr5 | - | View |
| Nelumbo nucifera | Nn2g14832 | chr2 | - | View | |
| Nelumbo nucifera | Nn7g36688 | chr7 | + | View | |
| Populus trichocarpa | Potri.009G070800 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Chr09 | - | View |
| Populus trichocarpa | Potri.001G276200 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Chr01 | - | View |
| Phaseolus vulgaris | Phvul.008G200700 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Chr08 | + | View |
| Phaseolus vulgaris | Phvul.006G030400 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | Chr06 | + | View |
| Quercus lobata | QL01p017342 | 1 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr5g0050641 | RcHm_v2.0_Chr5 | - | View | |
| Rhododendron simsii | Rhsim13G0210800 | chr13 | - | View | |
| Salix brachista | Sabra09G0053600 | GWHAAZH00000009 | - | View | |
| Simmondsia chinensis | Sc16g0011090 | GWHAASQ00000016 | - | View | |
| Simmondsia chinensis | Sc09g0001000 | GWHAASQ00000009 | + | View | |
| Sechium edule | Sed0027776 | LG08 | + | View | |
| Solanum lycopersicum | Solyc11g064800.3 | Protein LATERAL ROOT PRIMORDIUM 1 (AHRD V3.3 *** A0A2G3B9J0_CAPCH) | SL4.0ch11 | - | View |
| Schrenkiella parvula | Sp6g31310 | PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 | ch6-6 | + | View |
| Selenicereus undatus | Hund21984 | Scaffold_33680 | - | View | |
| Selenicereus undatus | Hund07440 | Scaffold_33676 | - | View | |
| Trochodendron aralioides | TAR623G0316 | group7 | + | View | |
| Theobroma cacao | Thecc.09G249500 | Chromosome_9 | - | View | |
| Tarenaya hassleriana | THA.LOC104799121 | protein LATERAL ROOT PRIMORDIUM 1 | NW_010968505.1 | + | View |
| Vigna mungo | VMungo0647G0330 | CM024073.1 | - | View | |
| Vitis vinifera | GSVIVG01037267001 | chr6 | - | View |